Yersinia ruckeri YRB: BD65_2012
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Entry
BD65_2012 CDS
T03611
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
yru
Yersinia ruckeri YRB
Brite
KEGG Orthology (KO) [BR:
yru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yru03016
]
BD65_2012 (trmE)
Transfer RNA biogenesis [BR:
yru03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
BD65_2012 (trmE)
Prokaryotic type
Methyltransferases
BD65_2012 (trmE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
AIG1
Ras
ABC_tran
Roc
AAA_28
Arf
Gtr1_RagA
SRPRB
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AJI96686
LinkDB
All DBs
Position
complement(2195844..2197208)
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AA seq
454 aa
AA seq
DB search
MSATDTIVAQATPPGRGGVGILRVSGRAVAAVAQAVLGKLPKPRYADYLPFRDTDGTTLD
QGIALYFPGPNSFTGEDVLELQGHGGPVILDLLLKRILALPGLRIARPGEFSERAFLNDK
LDLAQAEAIADLIDASSEQAARSAVNSLQGAFSIRIHQLVEALTHLRIYVEAAIDFPDEE
IDFLSDGKIEGQLNGVMSDLAKVRAEARQGSLLREGMKVVIAGRPNAGKSSLLNALAGRE
AAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVERIGIERAWNEIEQADRVL
FMVDGTTTDATEPAAIWPEFMARLPATLPITVVRNKADVTGETLGLTEVNGYSLIRLSAR
TGDGIDLLRDHLKQSMGFTSNTEGGFLARRRHLQALEMAAQHLVQGKEQLVSNYAGELLA
EELRLAQQSLSEITGEFSSDDLLGRIFSSFCIGK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaacggatactatcgtcgcacaagcaaccccaccaggccgcggtggggttggc
attttacgtgtttcaggtcgcgctgtggccgccgtggcccaagcggtgttgggtaaactt
cccaaaccacgctatgccgactatttacctttccgtgataccgatggcacgacgctagat
cagggtatcgctctctacttccctggcccgaattcttttactggcgaggacgtacttgaa
ttacagggccacggtggcccggtgatactggatttgttattaaaacgcattctggcgctg
ccaggcctgcgcattgctcgccctggagagttctccgaacgggcgtttctcaacgataag
ctggatttagcacaggcagaggccattgccgatctgattgatgccagctctgagcaggct
gcccgttctgcggtcaactcattacagggcgcattttctatccgcattcatcaactggtg
gaagcacttactcacttgcgaatctacgtagaggctgcgattgattttcccgatgaagaa
attgatttcctatctgatggcaagatcgaaggccaattaaatggtgtcatgagcgatttg
gcgaaagtccgggctgaagcccgtcagggtagtttgctgcgggaaggaatgaaagtcgtt
atcgctggtcgaccaaatgcaggcaaatccagccttctcaatgcattagctggccgtgaa
gccgcaattgtgacagatatagccggcaccacccgcgatgtactacgggaacacattcac
attgatggcatgccattgcatattatcgataccgctggtttacgcgaagccagcgatgaa
gtagagcggattggtatagaacgagcatggaacgagatcgaacaagccgatagagtgctg
tttatggtagacggaaccactactgatgcgaccgaaccggctgccatctggccagagttt
atggctcgattaccggcgacattgccgataaccgtagtacgaaataaagccgatgtaaca
ggcgagacgctaggtttaacggaagtgaatggttactcacttattcgtttatccgctcgc
actggcgatggaatcgatctgctacgcgaccatttgaagcaaagtatgggctttaccagc
aatactgaaggtggcttcctggcccgtcgccgtcatttacaggctctggaaatggcagcc
cagcatttggtgcaaggtaaagaacagctggtcagtaactacgctggggaattgttggca
gaggaattacgccttgctcaacagtcgcttagtgaaattacgggtgaattcagttcagat
gatttgttaggccgaattttctctagcttctgtatcgggaagtaa
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