Yersinia ruckeri YRB: BD65_2278
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Entry
BD65_2278 CDS
T03611
Symbol
frdB
Name
(GenBank) fumarate reductase iron-sulfur subunit
KO
K00245
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
yru
Yersinia ruckeri YRB
Pathway
yru00020
Citrate cycle (TCA cycle)
yru00190
Oxidative phosphorylation
yru00620
Pyruvate metabolism
yru00650
Butanoate metabolism
yru01100
Metabolic pathways
yru01110
Biosynthesis of secondary metabolites
yru01120
Microbial metabolism in diverse environments
yru01200
Carbon metabolism
yru02020
Two-component system
Module
yru_M00009
Citrate cycle (TCA cycle, Krebs cycle)
yru_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
yru_M00150
Fumarate reductase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
yru00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
BD65_2278 (frdB)
00620 Pyruvate metabolism
BD65_2278 (frdB)
00650 Butanoate metabolism
BD65_2278 (frdB)
09102 Energy metabolism
00190 Oxidative phosphorylation
BD65_2278 (frdB)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BD65_2278 (frdB)
Enzymes [BR:
yru01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
BD65_2278 (frdB)
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_10
Fer4_8
Fer4_17
Fer4_7
Fer4_16
Fer4_18
Fer4_9
Fer4
Fer4_2
Fer4_4
Fer2
Fer4_21
Fer4_6
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
AJI95382
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All DBs
Position
complement(2490143..2490877)
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AA seq
244 aa
AA seq
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MADMKVLKMEVMRYNPEKDSEPHFETFEVPYDEQTSLLDALGYIKDNLAPDLSYRWSCRM
AICGSCGMMVNRVPKLACKTFLREYTAGMKVEALGNFPIERDLVVDMTHFIESLEAIKPY
IIGNEQNPKEGPSRQTPAQMAKYHQFSGCINCGLCYAACPQFGLNPEFIGPAAITLAHRY
NLDTRDHGKKERMPQLNGNNGVWSCTFVGYCSEVCPKHVDPAAAIQQGKVESAKDFMIAM
LKPQ
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggctgatatgaaagtcctgaaaatggaggtcatgcgctacaaccctgaaaaggatagc
gagcctcacttcgaaacctttgaagtgccttacgatgagcaaacctcattgctcgatgcc
ttaggttacatcaaggacaatctggcacctgacctgtcttaccgctggtcttgccgcatg
gcaatctgcggttcttgcggcatgatggtaaaccgggtacccaaactggcctgtaaaacc
ttcctgcgggaatatactgcgggcatgaaagtcgaagcgttgggcaacttcccgattgag
cgcgaccttgtggttgatatgactcactttattgagagtctggaagcaatcaagccttat
atcatcggcaacgagcagaatcccaaagagggtccaagccgccagactccggcgcagatg
gcaaaatatcatcaattctccggctgtattaactgtggtttatgctacgccgcttgcccg
caattcggtctgaaccctgagttcattggcccggcagcgattacgctggcgcatcgttac
aatctggatacccgcgatcacggcaagaaagaacgtatgccacagctcaacggtaacaat
ggtgtctggagctgtacctttgtcggctattgctctgaagtttgtcctaagcacgttgat
ccggctgctgcgattcaacagggcaaggtcgaaagtgctaaagacttcatgatcgccatg
ctgaagccacaataa
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