Yersinia ruckeri YRB: BD65_2284
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Entry
BD65_2284 CDS
T03611
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
yru
Yersinia ruckeri YRB
Pathway
yru03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
yru00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
BD65_2284 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yru03019
]
BD65_2284 (orn)
03009 Ribosome biogenesis [BR:
yru03009
]
BD65_2284 (orn)
Messenger RNA biogenesis [BR:
yru03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BD65_2284 (orn)
Ribosome biogenesis [BR:
yru03009
]
Eukaryotic type
Pre-60S particles
RNases
BD65_2284 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AJI94859
LinkDB
All DBs
Position
2499801..2500346
Genome browser
AA seq
181 aa
AA seq
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MAGNENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPVLAVHQSDEQLALMDE
WNVRTHTGSGLVERVKASPFSDSDAEMQTISFLEQWVPAGKSPICGNSVGQDRRFLFRYM
PALEAYFHYRYLDVSTLKELARRWKPEILPGFKKQNTHQALDDIRESVAELAYYREHFIQ
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaaatgaaaataatctgatctggattgatctggaaatgaccggtctcgatcct
gagcgggatcgaattattgagattgcaacgctggttacggatgccaatcttaatattctc
gcggaagggccggttctggcggtccatcaatccgatgaacagttggcgttgatggatgaa
tggaatgtgcgtactcataccggtagcggcttggttgagcgagtgaaagccagcccattt
agcgattctgacgcggaaatgcagaccatttctttccttgagcagtgggtacccgcaggg
aaatcgcctatttgtggtaatagtgtcggtcaggatcgtcgtttcttgttccgttatatg
ccagcgctggaagcgtatttccattatcgttatctggatgtcagtaccttgaaagagctg
gcgcgtcgttggaaacccgaaatactaccgggctttaaaaagcaaaatacccatcaggcg
ttggacgacatccgtgagtctgtggcggaattggcctattatcgcgagcattttattcag
ttataa
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