Yersinia ruckeri YRB: BD65_2294
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Entry
BD65_2294 CDS
T03611
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
yru
Yersinia ruckeri YRB
Pathway
yru02024
Quorum sensing
yru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BD65_2294 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BD65_2294 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yru03019
]
BD65_2294 (hfq)
03036 Chromosome and associated proteins [BR:
yru03036
]
BD65_2294 (hfq)
Messenger RNA biogenesis [BR:
yru03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BD65_2294 (hfq)
Chromosome and associated proteins [BR:
yru03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
BD65_2294 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Motif
Other DBs
NCBI-ProteinID:
AJI95567
LinkDB
All DBs
Position
2509161..2509466
Genome browser
AA seq
101 aa
AA seq
DB search
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQVESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVSHHSNNPSGGTNNYHGSNPSAQQQPQQDSDDAE
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggggcaatctttgcaagatccgttcctgaacgcattgcgtcgtgaacgggtt
ccggtttctatttatttagtgaatggcattaaactgcagggccaagttgagtctttcgat
cagtttgtcattctgttgaaaaacacagttagtcagatggtgtataagcacgctatctct
actgttgttccgtctcgcccggtatcgcatcacagcaataatccgagtggcggcactaat
aattatcatggtagtaatccgtctgcgcagcaacagccgcagcaggatagcgatgacgct
gagtaa
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integrated database retrieval system