Yersinia ruckeri YRB: BD65_2319
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Entry
BD65_2319 CDS
T03611
Symbol
cpdB
Name
(GenBank) 2',3'-cyclic-nucleotide 2'-phosphodiesterase
KO
K01119
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:
3.1.4.16
3.1.3.6
]
Organism
yru
Yersinia ruckeri YRB
Pathway
yru00230
Purine metabolism
yru00240
Pyrimidine metabolism
yru01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
yru00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
BD65_2319 (cpdB)
00240 Pyrimidine metabolism
BD65_2319 (cpdB)
Enzymes [BR:
yru01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.6 3'-nucleotidase
BD65_2319 (cpdB)
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
BD65_2319 (cpdB)
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Gene cluster
GFIT
Motif
Pfam:
5_nucleotid_C
Metallophos
PTase_Orf2
Motif
Other DBs
NCBI-ProteinID:
AJI95761
LinkDB
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Position
complement(2532828..2534780)
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AA seq
650 aa
AA seq
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MIKRPLTLSLLACLVATSAQSATVDLRVLETTDLHSNMMDFDYYKDKPTEQFGLVRTASL
IDAARQQAVNSVLVDNGDLIQGSPLGDYMAAKGLKEGEIHPVYKAMNTLDYAVGNIGNHE
FNYGLDYLKKSLAGAKFPYVNANVIDVKTDKPLFQPYLIADTPVKDRDGKSHNLRIGYIG
FVPPQVMIWDKANLTGKVRVDDITETAKKWVPEMRKQGADLIIAIPHSGLSSEPYKTMAE
NSVYYLSQVPGINAIMFGHSHAVFPSKDFSAIKGADIAQGTLNGIPAVMPGQWGDHLGVV
DFVLNNDSGNWQVEQAKAEARPIYDKANKKSLAAENANLVKVLADDHKGTRDFVSQPIGT
ASDNMYSYLSLIQDDPTVQIVNNAQRAYTEHFIQGDPDLADLPVLSAAAPFKAGGRKNDP
ASFVEVEKGDLTFRNAADLYLYPNTLVVVKASGAEVKQWLECSAGQFNQIDVNSSKPQSL
INWNGFRTYNFDVIDGVNYQIDVTQPARYDGDCTLVNDNAERIKNLTYNGKPIDPKATFL
IATNNYRAYSGKFAGTGDSHIAFASPDENRSVVSAYISAETKKNGQVKPQADNNWHLAEI
VSSQPLDIRFETSPSAKAAKFIKQKAQYPMKPMGTDDIGFEVYQVDLQKK
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgataaagcgtcccctgacgttatccctactcgcttgcctggttgcaacctctgctcag
agtgctaccgttgatttacgcgtattggagaccaccgacctccatagcaacatgatggat
ttcgattactataaggataaacctaccgaacaatttggcttggtacgtactgccagcctg
attgatgccgcacgccaacaagcagtaaacagcgttctggtcgataacggtgatttgatc
cagggtagcccgctgggggattacatggcggccaagggtttgaaggaaggagagattcat
cccgtttataaagcgatgaatacactggattatgccgtaggaaacattggtaatcacgaa
tttaactatggtctggattatctgaagaaatcgctggctggggcaaaatttccctatgtc
aatgccaacgtcattgacgtaaaaaccgataaacccctatttcagccttacctgattgcc
gacacaccggtcaaagatcgcgatggaaaaagccacaatctacgtatcggttatatcggt
tttgtaccaccgcaggtcatgatctgggataaagccaatctgaccggcaaagtccgggtg
gatgatattacggaaaccgccaaaaaatgggtaccggaaatgcgcaagcagggggcggat
ttgattatcgcgatcccacattccggtttatccagcgagccatacaaaactatggctgaa
aactcagtgtattacctcagccaggttccgggaataaacgccattatgttcggccactcc
cacgcggtattcccaagtaaagattttagcgctatcaaaggcgcggatattgcacaaggc
actttaaacggtattcctgcagtgatgccaggccaatggggtgaccatctcggcgtagtg
gattttgttctgaataatgatagcggcaattggcaagttgaacaggccaaggctgaagcg
cgccctatctatgataaagccaataaaaaatcgctggccgcagaaaatgccaatttggtc
aaagtgctggccgatgatcataaaggaacccgcgatttcgttagccaaccgatcggtaca
gcgtcagataatatgtatagctatctgtcactgatccaggacgatccaaccgtgcagatc
gtcaacaatgcgcaacgcgcctataccgagcactttattcaaggcgacccggatttagcc
gatttaccggtactttctgctgccgctccgtttaaagccggtggccgcaaaaacgatccg
gccagttttgttgaagtcgaaaaaggcgatcttaccttccgcaatgctgcagatttatat
ctctatcccaacacgctggtagtcgtaaaagccagcggagcagaagtgaagcaatggctg
gagtgttctgccgggcaattcaaccagattgacgtcaatagcagcaaaccacagtctctg
attaattggaatggcttccgcacctataactttgatgtgattgatggtgttaactatcaa
attgatgtcacacaaccagctcgttatgacggcgactgtacgctggtcaatgataacgct
gagcgcatcaaaaatctgacctacaacggcaaaccaatagatccaaaagctacgttcctg
atcgccactaataattatcgggcttacagcggaaagtttgccggcactggcgatagccat
attgccttcgcctcaccggatgaaaaccgttcagtagtttctgcctatatcagcgccgaa
accaaaaagaatgggcaggtaaaacctcaggccgataataattggcatctagctgaaatt
gtcagctcgcagccactggatatccgctttgaaacctctccaagcgctaaagcagcaaag
tttatcaaacaaaaagcccagtatccgatgaagcccatgggtacagatgacataggtttt
gaggtttatcaggtggatttacagaagaaataa
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