KEGG   Yersinia ruckeri YRB: BD65_2391
Entry
BD65_2391         CDS       T03611                                 
Name
(GenBank) DNA polymerase III chi subunit, HolC family protein
  KO
K02339  DNA polymerase III subunit chi [EC:2.7.7.7]
Organism
yru  Yersinia ruckeri YRB
Pathway
yru03030  DNA replication
yru03430  Mismatch repair
yru03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:yru00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BD65_2391
   03430 Mismatch repair
    BD65_2391
   03440 Homologous recombination
    BD65_2391
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:yru03032]
    BD65_2391
   03400 DNA repair and recombination proteins [BR:yru03400]
    BD65_2391
Enzymes [BR:yru01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BD65_2391
DNA replication proteins [BR:yru03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BD65_2391
DNA repair and recombination proteins [BR:yru03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BD65_2391
SSDB
Motif
Pfam: DNA_pol3_chi
Other DBs
NCBI-ProteinID: AJI94517
UniProt: A0A085U965
LinkDB
Position
complement(2608942..2609391)
AA seq 149 aa
MKNATFYLLDHDQSSGELRAHEALACDLAAERWRAGKRVLIACESREQAQRLDEALWQRA
PEQFVPHNLAGEGPKYGAPVELAWPEKRGNSPRDLLISLLPEFAGFATAFHEVIDFVPYE
ETLKQLARDRYKSYRSVGFHLTTATPPTH
NT seq 450 nt   +upstreamnt  +downstreamnt
atgaaaaacgcaaccttctatcttctcgatcacgatcaatcctccggcgagctgcgggcc
cacgaagccttggcgtgcgatctggcggctgagcgctggcgggcaggcaaacgggtgctg
attgcatgtgaaagtcgggaacaggctcaacgtctggacgaagccttatggcaacgagcg
ccggaacaatttgtaccgcataatttggctggtgaagggccaaaatatggcgcaccggta
gaactggcctggccggaaaagcgtggaaactcaccgcgcgacctgctaattagcctgcta
cctgagttcgcaggttttgccaccgctttccatgaagtgatagacttcgttccttacgaa
gaaactttgaaacagttggcgcgcgaccgatataagtcatatcgcagcgtcggcttccat
ttgactacggctacgccgccaactcattga

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