Yersinia ruckeri YRB: BD65_2542
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Entry
BD65_2542 CDS
T03611
Name
(GenBank) AMP-binding enzyme family protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
yru
Yersinia ruckeri YRB
Pathway
yru00061
Fatty acid biosynthesis
yru00071
Fatty acid degradation
yru01100
Metabolic pathways
yru01212
Fatty acid metabolism
yru02024
Quorum sensing
yru04146
Peroxisome
Module
yru_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
yru00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
BD65_2542
00071 Fatty acid degradation
BD65_2542
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
BD65_2542
09145 Cellular community - prokaryotes
02024 Quorum sensing
BD65_2542
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
yru01004
]
BD65_2542
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
yru04147
]
BD65_2542
Enzymes [BR:
yru01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
BD65_2542
Lipid biosynthesis proteins [BR:
yru01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
BD65_2542
Exosome [BR:
yru04147
]
Exosomal proteins
Exosomal proteins of breast milk
BD65_2542
Exosomal proteins of breast cancer cells
BD65_2542
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AJI96127
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All DBs
Position
2796319..2798118
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AA seq
599 aa
AA seq
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MINKLQQYHLVSRLHQQINDRADRVAFRQWSPVTEMQLTWQQVGQHVKRISAALLALNVS
VQENVGIFANNSMAWSLVDLAILQLRAVSVPLYATNTAPQAAFVVNDADIRILFVGGQSQ
YDVAVTLKATCPQLESIVVLDPTVDLGSCEYAQYLSSFETEPDAEIQALLNARIDSRDLN
DLFTLIYTSGTTGEPKGVMLDYRNMAAQLSLHDERLTLTTDDISLSFLPLSHVFERAWSF
YVMHTGAQNVYISNTDWVRQAMQAVSPTVMCAVPRFYEKVFSAIHEKVAQAKWYRRALFY
WAVGCGKRKFRQQQKGRQPSWFSNQLNRLADRLVLQKLRGVLGGNVRFLPAAGARLDDNV
ILFFQAIGINIKYGYGMTETCATVSCWEEGRFRFGSIGKPLPGIEVRMGAENEIQIRGPI
VMRGYLNKPEETAATFTQDGWLKTGDAGAIDKQGNLFITERLKDLMKTSGGKYIAPQMIE
GTLGQDRFIEQIAVIADTRKFVSALIVPCFESLEEYAKSINLKYHDRLELLRHSHIVEMF
EQRLKEMQKELSKFEQVKRFTLLPQAFSMESGELTPTLKLRRKIISQRYQLEIDSMYRD
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgataaataaattgcagcaatatcatttggtgagtcgactgcatcaacagattaatgat
cgtgctgatcgggttgcttttcgccagtggtcacccgttactgaaatgcaacttacctgg
caacaagttggtcagcatgtaaaacgcatttcagctgcattattggctctgaacgtcagt
gttcaagaaaatgtcggaatctttgccaataacagcatggcttggtcattagtcgatttg
gccattttacagctgagagcggttagcgttcctctttatgccaccaatacggcgccccaa
gcggcttttgtggtcaatgatgcggatattcgcattctatttgttggtggccaatctcaa
tatgatgttgctgttacgctgaaagcgacttgcccacagttggaaagcattgtcgtgctg
gatccgacggtagatctgggtagctgtgaatatgcacaatatttatcgtctttcgaaacc
gaaccggatgcggagattcaggcattactcaatgcccgtatcgacagccgcgatttaaac
gatctctttacgctgatttatacctccggtaccacaggtgaaccgaaaggcgtgatgctg
gattaccgcaatatggcggctcagctctcccttcatgacgaacgcttgacgctaacgacg
gatgatatttcccttagcttcctgccgctttctcatgtttttgaacgtgcgtggagtttc
tatgtgatgcataccggcgcgcagaatgtctatatcagtaacactgattgggtacgtcag
gcgatgcaggcggtcagcccgacggtaatgtgtgccgttccacgattctatgaaaaagtc
ttcagtgccattcatgagaaagttgctcaggcaaagtggtatcgtcgggcgttattctat
tgggcagtaggctgtggaaagagaaaattccgtcaacaacagaaaggccgacaaccgtcg
tggttctccaaccagttaaaccgtctggctgatcgtttggtgctgcaaaagttgcgtggt
gttcttggtggtaacgtacgttttttaccggcggctggggcacgcctcgatgacaatgtg
attctgtttttccaggctattggtatcaatatcaagtatggctatgggatgacggaaact
tgcgcaacggtatcctgttgggaagaaggccgcttccgttttggttctatcggtaaacca
ctaccgggaattgaagtgcgtatgggggctgaaaatgaaattcagatccgtgggccgatt
gtgatgcggggttatttgaataagccggaagagacggcggctacctttacccaagacggc
tggttgaaaaccggtgatgctggtgccattgataagcaaggtaatctatttatcaccgag
cgtttgaaagacttgatgaaaacatcagggggcaaatacatcgcgcctcagatgatcgaa
ggcacgctgggtcaggatcgttttatcgaacaaatcgcagtgattgccgatacacgcaag
tttgtttcagcgttgattgtgccgtgtttcgagtctttggaagaatatgccaaatctatc
aatctgaaataccatgatcgtctggaattgttgcgccatagtcacattgtggaaatgttt
gagcagcgcttgaaagagatgcagaaagaactgtcgaaattcgagcaggtaaaacgtttt
acgctattgccacaggctttctcaatggagtccggtgaactgacgccaacccttaaatta
cgccgtaaaatcatttctcagcgctatcagttggaaatcgactctatgtaccgggattaa
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