Yersinia ruckeri YRB: BD65_2552
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Entry
BD65_2552 CDS
T03611
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
yru
Yersinia ruckeri YRB
Pathway
yru00300
Lysine biosynthesis
yru00550
Peptidoglycan biosynthesis
yru01100
Metabolic pathways
yru01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
yru00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BD65_2552 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BD65_2552 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
BD65_2552 (murF)
Enzymes [BR:
yru01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
BD65_2552 (murF)
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GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AJI93785
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Position
2808436..2809797
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AA seq
453 aa
AA seq
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MIPISLQQLAVQLDAELVGNDGMITEVTTDTRKVTADCLFVALKGERFDAHDFAENAIVA
GAGALLVSKRLLVDVPQIVVKDTRLALGQFAAWVRQQVPTKVVALTGSSGKTSVKEMTAA
ILRQCGNVLYTAGNFNNDIGVPLTLLRLTPEHDFAVIELGANHIGEIAYTTDLSRPEAAL
VNNLAAAHLEGFGSLAGVAQAKGEIFAGLAANGIAIINADSHDWSHWQTTLAHKQVWRFS
PQGGEDIDFYATDLSIEQQGMNFTLHSPFGHIVVSLPLPGRHNVANALAAAALAMSVGAD
LDAVRVGLSQLKAVPGRLFPLVLADGKLLLDDTYNANVGSMTAAVQVLAEMSGYRVMVAG
DMAELGETAEDCHRQVGHAAKLSGIDKVLTVGTLSQLISSASGHGEHFHDKSALTARLAA
LLSEHQVITVLIKGSRSAAMESVVQALQEKASC
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatttctctacaacaacttgcggtacagctcgatgctgaactggtcggcaac
gacggtatgattaccgaagtgactaccgatacgcgtaaggtgacggcagactgtctgttt
gtggcattgaaaggtgagcgttttgacgcacatgattttgcggaaaatgcgatagtcgca
ggtgctggggctttgctggtaagtaagcgcttattggtggatgtgccgcaaatcgtggtg
aaggacactcgtcttgctcttggtcagtttgctgcctgggtacgtcagcaggtgccaacc
aaagtggtggcgctgacgggttcttctggcaagacctcggttaaagaaatgaccgctgcg
attctgcgtcaatgcggtaatgtgctgtataccgctggtaactttaataacgatatcggc
gtgccgttgacgctactgcgtttaacgccagaacatgattttgccgttatcgagttgggt
gccaaccatattggtgagattgcttacaccaccgatttaagtcgtccagaagccgcgcta
gtgaataatttggcagctgcacatctggaaggttttggatcgttggcaggggttgcgcaa
gctaaaggcgaaattttcgccggtctagccgccaacggtatcgcgattatcaacgccgat
agccatgattggtcgcactggcagactacgctggcgcataaacaggtttggcgtttctcg
ccacagggcggtgaagatatcgatttttatgccaccgacctgagcattgaacagcaaggc
atgaatttcacgctgcattctccttttggtcatattgtcgtttcactgccgttaccaggc
cgccacaatgtggctaacgctttggctgcggcggctttggctatgtcggttggggctgat
ttagacgctgtccgcgtcgggctgtctcagctgaaggcggtgcctgggcgtttgttcccg
ttggtgttggccgacgggaaattgctgctggatgacacttataacgccaatgtgggttcg
atgacggcggcagtgcaggtcttggcagaaatgtcgggctaccgggtgatggtcgcgggt
gacatggcggagctaggtgaaactgccgaggattgccaccgtcaggttggtcacgctgcc
aaactgtccggtattgataaggtattaactgttggcacattaagtcaactgatcagcagt
gccagtggtcatggcgaacattttcacgataagagcgcgttgacggctcgtttggcagcg
ctgttgtccgaacatcaagttatcaccgtattaatcaaagggtcacgtagtgctgccatg
gaaagcgtagtgcaggcgttacaggagaaagcatcatgttag
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