Yersinia ruckeri YRB: BD65_2554
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Entry
BD65_2554 CDS
T03611
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
yru
Yersinia ruckeri YRB
Pathway
yru00470
D-Amino acid metabolism
yru00550
Peptidoglycan biosynthesis
yru01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
yru00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BD65_2554 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BD65_2554 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
yru01011
]
BD65_2554 (murD)
Enzymes [BR:
yru01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
BD65_2554 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
yru01011
]
Precursor biosynthesis
Amino acid ligase
BD65_2554 (murD)
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Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AJI94373
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Position
2810876..2812192
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AA seq
438 aa
AA seq
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MVDYQGKQVVIIGLGLTGLSCVDFFMTRGVTPRVMDTRINPPGLDKLPTSLDRHLGDLNQ
QWLLDADLIVASPGMALAHPALSAAADAGVEIVGDIELFCRENQAPIIAITGSNGKSTVT
MLVGEMAKAAGWQVGVGGNIGVPALTLLKQENQLVVLELSSFQLETTSSLQATAATILNV
TEDHTDRYPFGLQQYRAAKLRIYDNAKICVVNADDALTMPVRGADSRCISFGVDVGDYHL
NKQQGEIWLRVSGEKVLNTREMKLTGRHNYTNALAALALADAAGIPRSSSLKALTTYAGL
AHRFQLVFENRGVRWINDSKATNVGSTEAALDGLHIDGTLHLLLGGDGKSADFSGLTRFL
QGDKVQVYCFGRDGEQLAQLRPEVSQLTDTMEQAVRLLAPTLKAGDMVLLSPACASLDQF
RNFEQRGTEFARLAEELG
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggtggattatcagggtaaacaagtcgtcattattgggctgggactaaccggtctctcc
tgcgttgatttctttatgactcgtggtgtgacgccgcgcgttatggatacccgtatcaat
ccgcctggcttggataaactgccaaccagtttggatcgccatttgggcgatctgaatcag
caatggttactggatgcggatctgattgttgccagcccaggaatggcgttggcgcatcct
gcattgagtgcggctgcggatgctggtgttgagatagtcggtgatattgaactgttctgc
cgtgaaaatcaggcacctatcatcgctattaccggttcgaacggtaaaagtaccgtgact
atgctagttggcgaaatggcgaaagcggcaggctggcaagtgggcgtcggcggcaatatc
ggcgtgccagcgctgacattactgaagcaagaaaatcaattggtggttttggagttatcc
agcttccagcttgaaacgacctccagcctgcaagcaacagcggcgacgatccttaacgtg
accgaagaccatactgatcgttatccttttggtttacaacagtatcgcgctgctaaactg
cgtatctatgataacgcaaaaatctgcgtagtgaatgccgatgacgcgctaactatgcca
gtacgtggtgccgacagccgttgcatcagttttggcgttgatgttggcgattatcatctg
aacaagcaacagggtgaaatctggctgcgggtcagtggtgaaaaagtattgaacacccgt
gaaatgaagctgacgggtcgccacaattataccaatgccttagcggcgctggcgctggcg
gatgctgcgggtatcccgcgatcttccagcctgaaagcattaaccacttatgccggtttg
gctcaccgtttccaactggtgtttgaaaaccgcggagtgcgttggatcaatgattccaaa
gcgaccaatgttggtagcactgaagcggcactggacggcttacacatcgatggaaccttg
cacctgctgttagggggcgacggtaaatcggctgacttctctggacttacgcgtttcctg
caaggggacaaagtgcaggtgtattgctttggacgtgacggtgaacagctggcacagctc
cggcctgaagtatcgcaactgactgacaccatggaacaagcagtgagattattggcaccg
acgctaaaagcaggcgatatggtcttgttgtcaccggcttgtgcgagtttggatcagttc
cgcaactttgaacaacggggcacggaatttgcccgtctggcggaggaactgggctga
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