Yersinia ruckeri YRB: BD65_2752
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Entry
BD65_2752 CDS
T03611
Symbol
dnaQ
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
yru
Yersinia ruckeri YRB
Pathway
yru03030
DNA replication
yru03430
Mismatch repair
yru03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BD65_2752 (dnaQ)
03430 Mismatch repair
BD65_2752 (dnaQ)
03440 Homologous recombination
BD65_2752 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yru03032
]
BD65_2752 (dnaQ)
03400 DNA repair and recombination proteins [BR:
yru03400
]
BD65_2752 (dnaQ)
Enzymes [BR:
yru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BD65_2752 (dnaQ)
DNA replication proteins [BR:
yru03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BD65_2752 (dnaQ)
DNA repair and recombination proteins [BR:
yru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BD65_2752 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AJI94259
LinkDB
All DBs
Position
3033376..3034140
Genome browser
AA seq
254 aa
AA seq
DB search
MIPTPTRQIVLDTETTGMNKLGVHYEGHRIIEIGAVEVINRRLTGRNFHVYIKPDRLVDP
EAYGVHGISDEFLLDKPTFADIAPEFIEFIRGAELVIHNATFDIGFMDYEFRMLQQGIPN
TDTFCTITDSLLMARRLFPGKRNNLDALCDRYLIDNTKRTLHGALLDAEILSEVYLAMTG
GQTSLSFSMEGDQNQSDSAADIQRIVRPTSGLKIIYASDEELDAHHQRLDLVQKKGGSCL
WRITPEDENTANMG
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgatccctactccaaccagacagattgttctcgatactgaaaccaccggtatgaataag
ctgggtgttcactatgaaggtcaccgtattattgaaatcggtgccgtggaagtgattaac
cggcggctgaccggacgtaatttccatgtctatattaaaccggatcgtctggttgatccc
gaggcttatggcgttcacggtatcagtgatgagtttttgcttgataagccgactttcgcc
gatattgctcctgaattcattgagtttatccgcggtgcggagctggttattcataacgcc
acgtttgatatcggctttatggattacgaatttcgcatgttgcagcaaggtattccgaat
acagacactttctgtaccataactgacagtctgttaatggcgcgtcggctgttcccaggc
aagcggaacaatctcgatgcgttatgcgatcgctatctgatagataacaccaagcgcacc
ttgcatggcgcgttgcttgatgccgaaattctgtctgaagtctatttggcgatgacgggg
gggcaaacctctctttctttctcgatggaaggggatcagaatcaatcggattctgcggcg
gatattcagcggattgtacgcccaacgtcagggctgaaaattatttatgcgagtgatgaa
gagctggatgctcatcatcagcgcctggatctggtgcagaaaaagggaggaagttgttta
tggcgtattactcctgaggatgaaaataccgcaaatatgggttaa
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