Yersinia ruckeri YRB: BD65_3077
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Entry
BD65_3077 CDS
T03611
Name
(GenBank) tonB dependent receptor family protein
KO
K02014
iron complex outermembrane recepter protein
Organism
yru
Yersinia ruckeri YRB
Brite
KEGG Orthology (KO) [BR:
yru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yru02000
]
BD65_3077
Transporters [BR:
yru02000
]
Other transporters
Pores ion channels [TC:
1
]
BD65_3077
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AJI94667
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Position
3388767..3390806
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AA seq
679 aa
AA seq
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MDAINPIYYSLFYFISSIPLSINATEDNKQTNMEVIGQPYSEYGIARSSYQQEQQKLARI
AGGTNLMTPGEEGRLGTLQDALDYQPGLVIQNFFGGVDQPRLNIRGSGVQSAPLSRGVTL
LQDGLPLNDADGGFHISLLEPRESQFISVIRGANAVSPVSNALGGELDFISYTGADETGR
IRYEYGSFGRQGWQGALGGSDGDLDGRISISGDRFNGYRQHSASRRNAVRANLGYEGENF
ASRTWFSWTDLAFDVAGSLSQEQLKANPRSVFPLVLVRDPHRNVEQARIANRMSWHGDNR
QHQLGLWAQHTHDNFVTPVVYVLSGGNTYGAQWLTHLQQGQWHYRLGASTDRSDMERGLH
QNRRGKPDNYKLIGAYNMLAQNHNLAFGAGWQPNEQWRIDTDLKGTRSVRNALSKDGRSG
LDQHWYFLSPKLGVIWTPNPQQRWFGSLNWSNEAPSFREIISNKGLLTPLRPQQAVTLEM
GGAGTLTRHIKWDLALYRSLIADELITTYDSEGNSVGTFNYGSNTVHQGIEMGFKGHIPM
RDSSIEYRFAWTYNDFRFKGGEYAGKRIGGIPPQLISAEVLYQWQRWSIGPNLHWLPEIT
PVDHLNRTQIQARDKYAVWGIKMDYRHPDGWSAYLSMDNLTDKRYATASVTEREVTSKQS
KTLFPGMGRSINGGFTYTF
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggatgctataaatcccatttattactctcttttttattttatttcttcaatcccatta
tctattaatgccactgaagataataaacagactaatatggaggttattggtcagccatat
tcagaatatggtattgcgcgtagttcttatcaacaggaacagcaaaaacttgcccggatt
gctggcgggaccaatctgatgacacccggtgaggaaggccggttaggtaccttacaagat
gcattggactatcaaccgggattggtcattcaaaacttcttcggtggcgttgatcagcct
cgtctgaatattcgtggatctggcgtacagagtgcgcctttatctcgtggtgtaacccta
ttgcaagatggcctcccgctgaatgatgcggatggtggttttcatatcagcctgttggaa
ccgagagaaagtcagtttattagcgtaatacgcggtgccaatgcggtcagcccagtgagt
aatgctctcggcggcgagttggacttcatttcctataccggtgctgatgaaaccgggcgg
atacgttatgaatacggcagttttggtcgccaagggtggcagggtgctttaggggggagc
gatggcgatcttgacgggcgaatcagtatcagcggcgatcgttttaacggttatcgccag
cactcagcctcgcgtcgtaatgcagtcagagccaatctgggttacgaaggtgaaaatttt
gccagccgaacctggtttagttggactgatctggcatttgatgtcgcaggctctctgtcg
caggaacagctaaaagccaatccccgcagcgttttccctttggtgctggtgcgagatcct
caccgtaatgtagagcaagccagaatcgctaaccgcatgagttggcacggcgataatagg
caacaccaattagggttatgggcgcagcatacacacgataactttgtcaccccagtggta
tacgtgcttagcggaggcaacacttatggtgcgcagtggttgactcacttgcagcaaggc
cagtggcattatcgcttgggtgcatcgacagatcgatctgatatggaaaggggtttacat
cagaatcgacgaggaaaacccgataactataaacttatcggcgcttataacatgctggca
caaaaccataatctggcgttcggtgccgggtggcaacccaatgagcagtggcggattgat
accgatttgaaaggaacccgctcggtacgtaatgccttgtctaaagatgggcgtagtggg
ttggatcagcactggtattttctttcacctaagctgggggtgatttggacacctaatccg
caacaacgctggtttggtagtctgaattggagcaatgaagcaccgagctttcgtgagatt
atctccaataaaggtctattaaccccgctacgtccacagcaagcagtcacgttggaaatg
ggtggtgcaggtacattgacccgccacataaaatgggatctagcgctttatcgcagcctg
atcgccgatgagttgatcaccacttatgacagtgagggaaattcggtcggtaccttcaac
tatggcagcaacacggtgcatcaagggattgaaatggggttcaaagggcatattcccatg
cgcgatagcagcattgaataccgttttgcctggacctataacgattttcgctttaaaggt
ggagaatatgcaggcaaacgcattggcggcattccaccgcagttaatttctgctgaagta
ttgtaccaatggcaacgttggagtattggtcccaatttacattggttaccagaaataacg
ccagtcgatcatcttaatcgtacccagattcaggcgcgtgataaatatgcggtttggggc
ataaaaatggattatcgtcatcctgacgggtggtctgcttatctgagtatggataatctg
acggataaacggtatgccaccgcatcggtgactgaacgggaagtgacatcaaaacaaagt
aagacactattccctggaatgggccggtcaattaatggcggcttcacttatacattctaa
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