Yersinia ruckeri YRB: BD65_3239
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Entry
BD65_3239 CDS
T03611
Name
(GenBank) ycaO-type kinase domain protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
yru
Yersinia ruckeri YRB
Brite
KEGG Orthology (KO) [BR:
yru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
yru03009
]
BD65_3239
Ribosome biogenesis [BR:
yru03009
]
Prokaryotic type
ribosomal protein modification factors
BD65_3239
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Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
AJI94509
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Position
complement(3567100..3568866)
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AA seq
588 aa
AA seq
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MTQTFIPGKDAALEDSISRFQQKLSDLGFNIEEASWLNPVPHVWSVHIRDRNCPLCFTNG
KGASKKAALASALGEYFERLSTNYFFADFYLGKEIANGEFVHYPNEKWFPIPADGSLPQG
ILDARLHDFYNPDHELDANDLVDLQSGNVERGICSLPFTRQSDLETVYIPMNIIGNLYVS
NGMSAGNTANEARVQGLSEVFERYVKNRIIAESISLPEIPVEVLNRYPGVVEAIAKLEEE
GFPILSYDASLGGTYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRSLKDL
DVFTAPTFDDEEVAEHTNLETHFIDSSGLISWDMFKQDADYPFIDWNFSGTTEEEFATLM
AIFQQENAEVYIADYEHLGVYACRILVPGMSDIYPAEDLLMANNTMGMHLRETLLSLPDS
DWKPEEYLALIERLDDEGLDDFARVRELLGIASGKDNGWYTLRVGELKSMLALAGGDLEQ
ALVWVEWTQDFNASVLTPEQANYYRCLQTLLLLTQEPERDPVQYHAAFMKMYGQDAVDAA
SAVLCGEERFYGLFSVDADLKALPAHQALLGAYEKLQVAKRRYWEKTA
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaacttttatccctggcaaagacgctgcgctggaagactctatttcccgtttt
cagcaaaaattgagcgacctcggttttaatatcgaagaagcctcctggctcaatccggtt
cctcatgtttggtcagtgcatatccgtgaccgcaactgcccgttgtgttttaccaacggc
aaaggcgcaagtaagaaagccgcactggcctccgctctgggtgaatattttgagcgttta
tcaactaattatttcttcgctgatttttatctaggtaaagaaatcgccaatggcgaattc
gttcattacccgaatgagaagtggttccctattcctgctgatggctccttgccacaaggc
attttggatgcccgtctacatgatttttataatccggatcacgagctggatgccaacgac
ctggtggatttacagtcaggcaacgtagaacgtgggatttgctccctgccattcacccgt
cagtctgatctggaaacagtatatattcctatgaatattataggaaacctttatgtttca
aatggtatgtctgcaggtaacaccgccaatgaagcgcgggtgcaaggtttgtcggaagtt
ttcgaacgttacgtgaaaaaccgcattattgccgagtccatcagcctgccagaaatcccg
gtagaagtgctgaatcgctatcctggcgtggttgaagccattgcaaaactggaagaggaa
ggtttccctatcctttcttatgatgcctctttgggcggcacatatccggttatctgtgtg
gtgttgttcaatccggccaatggtacctgttttgcttcgttcggcgcgcacccagatttt
ggcgtcgctcttgagcgtaccgttaccgagctgctgcaaggccgtagtctgaaagatctg
gacgttttcaccgccccgacttttgatgacgaagaagtggctgagcataccaatctagaa
acccactttatcgattccagcggtttaatcagttgggatatgttcaaacaggatgcggac
tatccgttcatcgattggaacttcagcggcaccaccgaagaagaattcgccacgctgatg
gcgatcttccaacaggaaaatgctgaagtgtatatcgcggattacgagcatttgggcgtt
tacgcctgccgtattctggtaccgggcatgtccgacatctatccggctgaagatctgctg
atggcgaacaacacgatggggatgcatctgcgggaaacgctgctgtcattacccgatagt
gactggaagccagaagagtatctggcgcttatcgaacgactggatgatgaaggtctggat
gatttcgcccgagtacgtgaactgctcggtattgcctccggtaaagacaacggctggtat
accctgcgggttggtgagttgaaatcgatgctggcgctggcggggggtgacttggagcaa
gcattggtctgggtagaatggacacaggatttcaacgcctcggtattgactcccgaacaa
gcaaattattaccgttgcctgcaaaccttgctgttgttgacgcaagagccagaacgcgat
ccagtccaatatcacgctgcttttatgaaaatgtacggccaagatgccgttgatgccgca
tcggctgtattgtgtggtgaagagcggttctatggcctgtttagcgttgacgctgatttg
aaagccttgccggcccaccaggcattactgggggcttatgaaaaactgcaagtcgccaaa
cgtcgctattgggagaaaacggcataa
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