Yersinia ruckeri YRB: BD65_3253
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Entry
BD65_3253 CDS
T03611
Symbol
kdsB
Name
(GenBank) 3-deoxy-D-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
yru
Yersinia ruckeri YRB
Pathway
yru00541
Biosynthesis of various nucleotide sugars
yru01100
Metabolic pathways
yru01250
Biosynthesis of nucleotide sugars
Module
yru_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
yru00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
BD65_3253 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
yru01005
]
BD65_3253 (kdsB)
Enzymes [BR:
yru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
BD65_3253 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
yru01005
]
Lipid A
BD65_3253 (kdsB)
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Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
NTP_transferase
PylC-like_N
Motif
Other DBs
NCBI-ProteinID:
AJI95933
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Position
3584484..3585242
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AA seq
252 aa
AA seq
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MSFIAIIPARYASTRLPGKPLADIGGKPMVVHVMERALESGANRVIVATDHEDVMRAVEA
AGGEVCLTRVDHQSGTERLAEVIEHYSFADDDIIVNVQGDEPLIPPVIIRQVANNLAASR
AGMATLAVPIESSEEAFNPNAVKVVMDAQGYALYFSRAAIPWERERFAQSKDSIGDCFLR
HIGIYAYRAGFIRRYVNWAPSKLEQIELLEQLRVLWYGEKIHVAVAEAAPTVGVDTLEDL
QRVREILRKKCN
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgagttttattgcgattattcctgcacgctatgcgtcaacccgtttaccgggtaaacct
ctggccgatattggtggtaaaccgatggtggttcacgtgatggaacgggctttagagtct
ggagccaaccgggttattgttgcaacggatcatgaagatgtgatgcgggcggtagaggct
gcgggtggcgaagtgtgtctgacccgagtggatcaccagtcaggtactgaacgtttggct
gaggtgattgagcattacagttttgctgatgacgacattattgtcaatgtgcaaggcgat
gagccactgatcccaccggttattatccgtcaggtcgcgaataatttggctgcatcacgc
gcgggtatggccacgcttgcggtaccgattgaaagcagcgaagaggcatttaacccgaat
gcggtcaaagttgtgatggatgctcagggttacgcgctctatttctcccgcgcagctatt
ccctgggagcgtgagcgttttgctcaatctaaagacagtatcggtgactgttttctccgc
cacataggtatttatgcatatcgagctggttttattcgtcgctatgttaattgggcaccg
agtaaattggagcaaatagaattactcgagcaattgcgagttctgtggtatggcgaaaaa
attcatgttgctgttgccgaagcggctccaactgtaggtgttgatacgctagaagacctg
caaagagttcgggaaatcctgcgcaaaaaatgtaattaa
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