Yersinia ruckeri YRB: BD65_391
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Entry
BD65_391 CDS
T03611
Symbol
nifJ
Name
(GenBank) ferredoxin (flavodoxin) oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
yru
Yersinia ruckeri YRB
Pathway
yru00010
Glycolysis / Gluconeogenesis
yru00020
Citrate cycle (TCA cycle)
yru00620
Pyruvate metabolism
yru00650
Butanoate metabolism
yru00720
Other carbon fixation pathways
yru01100
Metabolic pathways
yru01110
Biosynthesis of secondary metabolites
yru01120
Microbial metabolism in diverse environments
yru01200
Carbon metabolism
yru01210
2-Oxocarboxylic acid metabolism
Module
yru_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
yru00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
BD65_391 (nifJ)
00020 Citrate cycle (TCA cycle)
BD65_391 (nifJ)
00620 Pyruvate metabolism
BD65_391 (nifJ)
00650 Butanoate metabolism
BD65_391 (nifJ)
09102 Energy metabolism
00720 Other carbon fixation pathways
BD65_391 (nifJ)
Enzymes [BR:
yru01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
BD65_391 (nifJ)
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Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4_16
Fer4_7
Fer4_9
Fer4
Fer4_10
TPP_enzyme_C
Fer4_6
Fer4_21
Fer4_8
Fer4_2
Fer4_17
Fer4_4
DUF2732
Transketolase_C
VP1-like_C
Motif
Other DBs
NCBI-ProteinID:
AJI94430
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All DBs
Position
436114..439644
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AA seq
1176 aa
AA seq
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MITTDGNSAVASVAYRASEVIAIYPITPSSTMAELADAWSGNGKTNIWGDIPSVIEMQSE
GGAIATVHGALQTGALSTSFTSSQGLLLMIPTLYKLAGELTPFVLHVAARTVATHALSIF
GDHSDVMAVRQTGCAMLCASNVQEAQDFSLISHMATLNSRIPFIHFFDGFRTSHEINKIV
PLSDDKLRQLLPQKGIDQHRSRALTPDHPVIRGTSANPDTYFQCREASNPWYNQTYQHVA
DAMQAFVDATGREYKPFEYYGHPQAERVIVLMGSAIGTCEEVIDTLLTRGEKVGMVKIRL
FRPFSAEHLLSVLPVSASKIAVLDRTKEPGALAEPLYLDVMTSLAEAYSRGARASLPKVI
GGRYGLSSKEFGPDCALAIFKELTLAMPRPRFTVGIFDDVTGLSLPLSHESIPQRATLEA
LFYGLGSDGSVSATKNNLKIIGNSTSMYAQGYFVYDSKKAGGLTVSHLRISPTPIYSAYL
INQADFVGCHQLQFIDVYPMAERLKPGGIFLLNSPFDREEMWQRLPQEVQAVLHQRQARF
YVINAAKIARECQLGTRINTVMQMAFFHLTQILPTEVARQQLRDAIERSYSSKGQDIVAR
NGRALDATLNALMAIPLEPIDANSLMRPPIVSDQAPDFVKTVTAAMLAGLGDALPVSAFP
PDGTWPLGTTQWEKRNIAEQIPIWQPDLCTQCNHCVAACPHSAIRAKVVPPSAMTDAPAS
LHALDVKARDMRGQKYVLQVAPEDCTGCNLCYEVCPAKDRQNPAIKAINMQPRLAHLAEE
KAHYNFFLQLPEIDKTQIERIDIRTSQLISPLFEYSGACSGCGETPYIKLLTQLYGDRLL
IANATGCSSIYGGNLPTTPYTTDAAGRGPAWANSLFEDNAEFGLGFRLTVDQHRQRVQRL
LTTLAPQLPPELVTQLMSDASTEVRRDQVTQLRQRLASMTSHDAKQLATDADYLVDKSIW
LIGGDGWAYDIGFGGLDHVLSLTENVNVLVLDTQCYSNTGGQQSKATPLGAVTKFGEHGK
RKARKDLGVSMMMYGHVYVAQISLGAQLNQTVKAIQEAEAYPGPSLIIAYSPCEEHGYDL
AYSHEQMKQLTTTGFWPLYRFDPRRAEEGKAPLALDSRPPASDLTATLLNEQRFRRLNTQ
EPEIAAKLYADAEKDLKKRYNFLSLLAGKAEKDTAE
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgatcacaactgacggcaacagcgcagtcgcctccgtggcttaccgcgccagtgaagtg
attgccatctaccctatcactcccagctcgacaatggcggaactggcggatgcttggtcg
ggcaacggcaaaaccaatatttggggtgatattcccagtgtcatagaaatgcagtctgaa
ggtggcgcaatcgccacggtacacggcgcgttgcaaaccggtgccttatcgacctcattc
acttcttcccagggtttgctgttaatgattccaaccctgtataaattagccggtgaatta
accccctttgtcttgcacgtcgccgcccgaactgtcgccacacatgctttatcgatcttt
ggcgatcattccgatgtcatggccgttcgtcaaaccggttgcgccatgctttgcgccagt
aacgtgcaggaagctcaggatttttcgctgatctcacatatggcaaccctgaatagccgc
attccttttatccattttttcgatggtttccgcacctctcacgaaatcaacaaaattgtc
ccactcagtgatgacaaactacgccaattgttaccacaaaaaggtattgatcaacatcgt
agccgggcactcacaccggatcatccggtaatccgtggtacatcggccaatcccgatacc
tatttccagtgcagagaagccagcaatccctggtataaccaaacctatcagcatgtagct
gatgccatgcaggcctttgttgatgccactggtcgcgaatataagccatttgaatactat
ggccatccacaggctgaacgggtgatagttttgatgggttcggccatcggcacctgtgaa
gaagtgattgatactctgctgactcgcggggaaaaagtcgggatggtaaaaattcgtctt
tttcggcctttttctgctgaacacctgctcagtgtattaccggtatcagccagtaaaatc
gcggtgctggatcgcactaaagaaccgggagccttagctgaaccgctctatctggatgtg
atgacctcgctggctgaagcctacagtcggggagcgcgtgccagtttgccaaaagtcatt
ggcggacgttatggattatcctccaaagagttcggcccagactgcgcactggctatcttt
aaagagcttacccttgctatgccacgaccacgttttaccgtcggtatttttgacgatgtc
accggtctttccctgccattgtcccatgaaagcatcccacagcgcgccacactggaagcg
cttttttacgggcttggtagcgatggatcggtttctgccaccaaaaacaacctcaaaatc
atcggcaatagtacctcaatgtatgctcagggttattttgtctatgactccaaaaaagcc
ggtggtctgacggtttctcatttacgcatcagccctacgccgatttattccgcctatctg
attaatcaggccgatttcgtcggttgccatcaactgcaatttatcgatgtttaccccatg
gctgaacgcctgaagccgggaggtattttcctgctgaatagtccatttgatcgcgaagag
atgtggcagcgcttaccgcaggaagttcaggccgtactccaccagcgccaagcccgtttt
tatgtgattaatgccgcaaaaatcgcccgagaatgtcaactgggcacccgtattaacact
gtcatgcaaatggcattcttccatttaacccaaatcctgccgaccgaagtggcccggcag
cagttacgcgatgcgattgaacgcagttatagcagtaaaggtcaggatatcgttgcacgc
aacggacgggcgctggatgccacgttgaatgctttgatggcaatcccgctggaacccatt
gatgccaatagcctgatgcgcccaccaatcgtgtctgatcaagcacctgatttcgtgaaa
accgtcaccgctgcgatgttggccggtttgggtgatgcgctacccgtctcggccttcccg
cctgacggtacttggccgctgggaacgactcaatgggaaaaacgcaatattgcggaacag
attccaatctggcagccggatctgtgtacccaatgcaaccactgcgtggcggcctgcccg
cactcggccattcgtgccaaagtggtgccaccgagcgcaatgaccgatgcgcccgccagt
ttgcacgctctggatgtcaaagcgcgcgatatgcgtgggcagaaatatgtcctgcaggtg
gctcccgaagactgcaccggctgcaatttatgctatgaggtctgcccagctaaagatcgg
cagaatcccgccatcaaagccatcaatatgcagccccggctggcacatttggcggaggaa
aaagcccattacaacttcttcctgcaactgccggaaatcgataaaacccagattgaacgc
atagatatccgcacttctcagctaatttctccgttgttcgagtactctggagcctgctcc
ggctgcggtgaaacgccttatatcaaattattgactcagttgtatggtgaccgattgctg
attgccaatgccactggctgttcctctatctatggcggcaatttgccgaccacgccttac
accaccgatgccgcaggacgcggcccggcctgggcaaactcgctgtttgaagacaatgct
gaattcggtttgggcttccgtctgacggtggatcaacaccgccagcgcgtgcagcgtctg
ctgactaccctggcaccgcagttaccgccagaattggtaacacaattaatgagcgacgcc
agcacggaggttcgccgcgatcaggtcactcaattgcgtcaacggctagcaagcatgacg
agccatgatgcgaagcagttagccaccgacgccgactatctggtggataaatccatctgg
ctgattggcggggatggctgggcctacgatattggttttggcggattggatcatgtactt
agtctgactgaaaacgtcaatgtgctggtgctagatacccaatgttactccaataccggt
ggccagcagtctaaagccaccccattgggcgcggtgaccaagtttggtgagcacggcaaa
cgtaaggcacgcaaagatcttggcgtcagtatgatgatgtacggccatgtttatgtggct
caaatctcactgggtgcgcagctcaaccaaacggtgaaagcgattcaggaagccgaagcc
tatccggggccatcgctgatcattgcctacagcccttgtgaagaacatggctatgatttg
gcttacagtcatgagcagatgaagcaactgaccaccaccggtttttggccgttgtatcgt
ttcgatcctcgtcgtgctgaagaaggcaaagcgccattagcgctggattctcggcctccg
gctagcgatctcaccgccaccttgcttaacgaacagcgattccgtcgcctgaatactcaa
gaaccggaaattgcggccaagttgtatgccgatgcagagaaggatctcaaaaaacgctac
aatttcctcagtctcttagccggtaaagccgaaaaagacacggcggaataa
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