Yersinia ruckeri YRB: BD65_477
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Entry
BD65_477 CDS
T03611
Name
(GenBank) dolichyl-phosphate-mannose-mannosyltransferase family protein
KO
K07264
4-amino-4-deoxy-L-arabinose transferase [EC:
2.4.2.43
]
Organism
yru
Yersinia ruckeri YRB
Pathway
yru00540
Lipopolysaccharide biosynthesis
yru01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
yru00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
BD65_477
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
BD65_477
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
yru01005
]
BD65_477
Enzymes [BR:
yru01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.43 lipid IVA 4-amino-4-deoxy-L-arabinosyltransferase
BD65_477
Lipopolysaccharide biosynthesis proteins [BR:
yru01005
]
Lipid A
BD65_477
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PMT
PMT_2
DUF1980
Meckelin
Motif
Other DBs
NCBI-ProteinID:
AJI93788
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Position
complement(526542..528209)
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AA seq
555 aa
AA seq
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MSKALKSGGAVLLAIFFALLYLLPLNGRLLWQPDETRYAEISREMLQRGDWVVPHLLGIR
YFEKPIAGYWINNISQWIFGDNNFAVRFGSVFSTGLSALLVFWLATLMWRNRNTALLATF
IYLSSLLVFSIGTYSVLDPMITLWLTASMLCFYLTQQASSTRQKVTAYVFLGLACGMGFM
TKGFLALAVPVIAVIPIVIQQRRVKELLLFGPIAIVFALLLSLPWALAIGSREPDFWHYF
FWVEHIQRFAEKDAQHKAPFWYYLPLLCLGVLPWLGLLPGALLKGWRERVKRPELFFLLS
WVLMPLLFFSIAKGKLPTYILPCIAPLSLLMAAYARDCVSEMRMGALKVNGYINLLFGSL
CAVAILVIGLGAVPHLVVFSADERIKVVLGVLSFAAWGLVGYFCVRNHARRWQWAALCPL
LFALLVADLIPQSVIDSKQPQDFIQKNRAELSQSRYVLSDGVGVASGLAWELKRSDIIMF
SEMGEVNYGLSYPDAKDHYVSYQDFPQWLENARKQGNVSLVLQLSRGEQIAAGLPTANKV
VQNNRMALLWYRQIR
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaggcattgaaaagcggtggcgcagtgttgctggcgatttttttcgccttactc
tacttgctgccactgaatggtcgtttgctgtggcagccggatgaaacccgctatgctgaa
attagccgcgaaatgttacagcgtggtgattgggtggtgcctcatttattgggaatccgt
tattttgaaaaaccgattgctggatattggattaataatattagtcagtggatcttcggc
gataataactttgccgtgcgatttggttcggtgttcagcaccggattaagtgcattgtta
gtattttggctagccacattaatgtggcgcaatcgtaatacggcgctgctggccactttt
atctatctatcctcattactggtattcagcattggtacgtatagtgtcctcgacccgatg
attaccttgtggttgacggcgtcgatgttgtgtttctatctgacccagcaggccagtagt
acccggcagaaagtcacggcctacgtctttttaggcctagcctgcgggatgggatttatg
accaaaggttttctggcgctggcagtaccagtcatcgcggttattcccattgtgattcaa
cagcggcgggtaaaagagttactgttatttggtccgatcgctattgtttttgccttatta
ttgagcttgccttgggcgttggcgattggcagccgtgagccggatttttggcattatttc
ttttgggtggagcatattcaacgctttgcggaaaaagatgcgcaacacaaagcgccattc
tggtattacctaccgctgttgtgcctcggggtattgccttggttaggattattaccagga
gcattgcttaaaggttggcgcgaaagagtcaaacgaccagagttattcttcctgttgagt
tgggtattaatgccgttgctgttcttcagtatcgccaaaggtaagttaccgacttatata
ttgccgtgtattgcgcctttatcattattaatggccgcttatgcacgagattgtgtcagt
gaaatgcgtatgggcgcgctgaaagtcaatggctatatcaatctgctattcggttcgctg
tgtgcggtggcgatattagtgattggtttaggggcggttcctcatttggtggttttctct
gctgacgagagaattaaagttgttttgggcgttttgtcgtttgccgcctgggggctggtg
ggatatttctgtgtgagaaatcatgcccgtcgctggcaatgggcggcgttgtgtccgctg
ctgtttgcgctgttggtggccgatttaattccccaatctgtcattgattcaaaacagccg
caggattttattcagaaaaaccgagcggaactgagccagagtcgctatgtgttaagtgat
ggcgtgggtgtcgcttctgggctagcctgggagttgaaacgcagcgatatcattatgttt
agcgaaatgggtgaggtgaattacggtttgtcttatcctgatgctaaagaccattatgtg
agttatcaggatttccctcaatggctggaaaacgcccgtaagcaaggtaatgtttcgctg
gtattacagttatcccgaggggaacagatagcagctggcctgccaacggcaaataaagtg
gtgcaaaacaatcggatggctttattgtggtatcggcaaatccgatga
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