Yersinia ruckeri YRB: BD65_548
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Entry
BD65_548 CDS
T03611
Symbol
exoX
Name
(GenBank) exodeoxyribonuclease 10
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
yru
Yersinia ruckeri YRB
Pathway
yru03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
yru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BD65_548 (exoX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yru03400
]
BD65_548 (exoX)
DNA repair and recombination proteins [BR:
yru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BD65_548 (exoX)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
AJI95535
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All DBs
Position
594045..594707
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AA seq
220 aa
AA seq
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MNFRVIDTETCGLDGGIVEIASLDFIDGEITNPMSDLVSPDRPISVEAMAIHHITEEMVE
GKPRIAVAVGKYQGSPYYVAHNAPFDRGVLPEMGGEWICTYKLARALYPDIKYSNQYLRY
ALRLDVTPPADLYPHRALYDCYITAALFQRIMRDSGWSAEKMVELTQAPLLLRTLEFGKY
RGKNIEQIARQDPDYLRWMLKSVKDLTPDMRHTLTHYLES
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgaattttcgtgtgattgatactgagacctgcgggttggatggcggtatcgtcgaaatt
gcatcactggattttattgatggagaaatcactaatccgatgagcgacctggttagccca
gatcgaccaatcagcgttgaagctatggctattcaccatattaccgaagaaatggtcgag
ggaaagccacgcattgccgtagccgttggcaaatatcagggcagtccgtattacgttgca
cacaacgctccgtttgatcgcggtgtgttgccagaaatgggtggtgagtggatttgcact
tataagctggcgcgggcgctgtatccagatattaaatacagtaaccagtatttgcgctat
gcattgcgtctggatgttacgccgccggcagatttgtaccctcaccgcgcactttatgat
tgctatatcaccgcggcattattccagcggattatgcgtgattctggctggagcgcggag
aaaatggtcgaactgactcaagccccattgttgttaagaacgttagaatttggcaaatat
cgcgggaaaaatattgaacagatagcccgacaggatccggactatctgcgctggatgttg
aaatcggtgaaagatctgacgccagatatgcgccataccttgacgcattatctggaatcc
tga
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