Yersinia ruckeri YRB: BD65_788
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Entry
BD65_788 CDS
T03611
Symbol
nikE
Name
(GenBank) nickel import ATP-binding protein NikE
KO
K13896
microcin C transport system ATP-binding protein
Organism
yru
Yersinia ruckeri YRB
Pathway
yru02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
yru00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
BD65_788 (nikE)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yru02000
]
BD65_788 (nikE)
Transporters [BR:
yru02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Microcin C transporter
BD65_788 (nikE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
AAA_22
oligo_HPY
AAA_16
AAA_29
AAA_13
AAA_25
nSTAND1
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AJI94194
LinkDB
All DBs
Position
855562..857157
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AA seq
531 aa
AA seq
DB search
MANSTPLLDIQNLSIAFRQNRQERQVVSQLSLQIEAGETLALVGESGSGKSVTALSVLRL
LPSPPVIYPSGDILFAGQSLLHAHEDHLRSIRGNQIAMIFQEPMVSLNPLHSIEKQLAEV
LSLHRNMRQEAARAEIISCLDRVGIRNAKMRLGDFPHQLSGGEQQRVMIAMAVLTQPKLL
IADEPTTALDVSVQAQILSLLKELKQELGMSLLFITHNLNIVRRLADNVAVMREGRRVEL
NSRQALFSHPQHPYTRQLLDAEPQGEPLPLPPMTEPLLQVKNLQVAFPIKKGLLRRTVAR
HYAVNGVSFDLRPGESLGLVGESGSGKSTTGLALLRLLPSSGEILFAGQPLHRFNAKQML
PFRSRIQVVFQDPYSALNPRLAVWQIIAEGLEVHQKLTVAEREQRVITAMEEVGLNPETR
HRYPTEFSGGQRQRIAIARALILQPQLLILDEPTSSLDKSVQAQILALLKSLQQRHQLSY
LFISHDLQVVKSLCHQLIVLKQGEVVEQGECRQVLTSPTQLYTQQLLQLAD
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggccaattcaaccccactgctggatatccagaatctcagcattgcgtttcgtcaaaat
cggcaagaacggcaagttgtcagccaactttcgttacagattgaggcgggggaaaccttg
gcattagtgggggaatctggctcaggcaaaagcgtgaccgcgctgtcagtgctgcggttg
ttaccctctccaccggttatttatcccagtggggatattctgtttgccggtcaatcgcta
ctccatgctcatgaagaccacctacgcagtattcgcggtaaccagattgccatgattttt
caggaaccgatggtatcgctcaatccactgcacagcattgaaaaacagctggcggaagtg
ttgtcactccatcggaatatgagacaggaagcggcgcgcgccgaaatcatcagttgtctg
gatcgcgtcggtatccgcaatgccaaaatgcgtctgggcgattttccccatcaactatct
ggcggtgaacagcaacgggtcatgattgcaatggcggtgctaacccaacctaagttattg
attgccgatgaacccaccacggcgctggatgtctctgtacaggcgcagatcctatccttg
ttgaaggaactcaaacaagaattaggcatgagcttgctgtttatcacccataacctgaat
attgtccgccggttggccgataacgtcgcggtgatgcgtgaaggccgcagagtggagctt
aatagccgtcaggcgctgttttctcacccacagcatccctatacccgccaattgcttgat
gccgaacctcagggagagccactgccgttgccgccgatgaccgaaccgttgctacaggta
aaaaacttacaggtcgctttcccgattaaaaaagggctgctgcgacgaacggtagctcgc
cactatgcggtcaacggcgtcagttttgatttacgtccgggagagagtttaggtttggtg
ggcgaatccggttcgggtaaaagcaccaccgggctggcattgctgcgtttactgccctcc
tcgggggaaatactgtttgcgggtcagccactgcaccgcttcaatgccaaacagatgttg
cccttccgcagccggatacaagtggtatttcaggatccttattcagcactcaatccacgc
ctggctgtttggcaaattattgccgaaggcttggaggttcatcaaaaactcaccgttgcc
gagcgggaacagcgcgtcatcaccgcaatggaagaagtggggctaaatccagaaacccgt
caccgttatccaactgagttttccggtggacagcgtcagcgaattgctattgcccgggcg
ttgatattacaaccgcagctattaattctcgatgagccgacgtcgtcattggataaatcg
gtgcaggctcagattctggcactgctaaaatcacttcagcaacgtcatcaactaagctat
ctgtttatcagccatgatttgcaggtggtgaaatcactttgccaccagttaatcgtcctg
aaacaaggcgaggtcgtggaacaaggagaatgcaggcaagtactgacttcaccgacgcag
ctttacactcagcagctactgcaactggccgattga
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