Yersinia ruckeri YRB: BD65_87
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Entry
BD65_87 CDS
T03611
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
yru
Yersinia ruckeri YRB
Pathway
yru04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
yru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
BD65_87 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yru03016
]
BD65_87 (trmU)
Enzymes [BR:
yru01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
BD65_87 (trmU)
Transfer RNA biogenesis [BR:
yru03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
BD65_87 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_C
tRNA_Me_trans_M
NAD_synthase
ThiI
Asn_synthase
QueC
DUF7411
ATP_bind_3
Arginosuc_synth
Motif
Other DBs
NCBI-ProteinID:
AJI96471
LinkDB
All DBs
Position
complement(94903..96018)
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AA seq
371 aa
AA seq
DB search
MSDNSQKKVIVGMSGGVDSSVSAYLLQQQGYQVAGLFMKNWEEDDNEEYCSAATDLADAQ
AVCDKLGMELHTVNFAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL
GADYIATGHYVRRHDVNGKSQLLRGLDSNKDQSYFLYTLGHDQLAQSLFPVGELEKPEVR
RIAETLDLVTAKKKDSTGICFIGERKFRDFLARYLPAQPGQILSVDGQYLGEHQGLMYHT
LGQRKGLGIGGTKEGGDDPWYVVDKDVANNVLVVAQGHEHPRLMSTGLIAQQLHWVDRQA
VIAPFRCVVKTRYRQQDIPCTVTPLDDERIDVCFDQPVAAVTPGQSAVFYQGEVCLGGGV
IESRHPLSETA
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgtcagataacagccagaaaaaagtaatcgtcggtatgtccggcggcgtcgattcttcc
gtttccgcttacctgctccaacaacagggttaccaggttgctggcctgttcatgaagaac
tgggaagaagacgataatgaagaatattgctccgcagcgaccgatttggccgatgctcag
gcagtgtgcgataagctgggcatggagttacataccgtcaatttcgccgcagaatactgg
gataacgtttttgaactcttccttgaggagtacaaagcgggtcgaacgccaaatccggat
attctgtgcaacaaagaaatcaaatttaaggcctttctggaattcgccgctgaagatctc
ggtgccgattatattgctaccggtcattacgtgcgtcgccatgatgtcaatggcaaaagc
cagctactacgtggtctggacagcaataaagatcagagctatttcttgtatactcttggt
cacgatcagttggcgcaaagtctattccctgttggcgagcttgagaaaccggaagttcgt
cgcattgcagaaaccttggatctggtgaccgcgaagaaaaaagactccaccggtatctgt
tttattggcgagcgtaaattccgtgatttcctggctcgctatctgccagctcaaccaggc
cagattctgtcagtggatggccaataccttggagaacatcaagggttgatgtatcacact
ctcggccagcgtaaaggtctgggcatcggtggtaccaaagaaggtggcgatgacccgtgg
tatgtggtggataaagacgtcgccaacaacgtcctggtagtggcgcaaggtcatgaacat
ccgcgtttgatgtctaccgggctgatcgcccaacagctacattgggtcgatcgccaagcg
gttatcgcaccgtttcgctgcgtggtgaaaacgcgttaccgtcagcaggatattccctgt
acggtgacgccactggatgatgagcgcattgatgtgtgctttgaccagccggttgcagca
gtgactcccggccagtcagccgtgttttatcaaggtgaagtgtgcctcggtggtggggtt
atcgaatcgcgccatccattaagcgaaacggcataa
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