Yersinia ruckeri YRB: BD65_979
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Entry
BD65_979 CDS
T03611
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
yru
Yersinia ruckeri YRB
Pathway
yru00300
Lysine biosynthesis
yru01100
Metabolic pathways
yru01120
Microbial metabolism in diverse environments
yru01230
Biosynthesis of amino acids
Module
yru_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
yru00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BD65_979 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
yru01002
]
BD65_979 (dapE)
Enzymes [BR:
yru01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
BD65_979 (dapE)
Peptidases and inhibitors [BR:
yru01002
]
Metallo peptidases
Family M20
BD65_979 (dapE)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Peptidase_M18
Motif
Other DBs
NCBI-ProteinID:
AJI94060
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All DBs
Position
1058921..1060048
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AA seq
375 aa
AA seq
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MICPVIDLAQQLIRRPSLSPEDAGCQDIMIQRLQAIGFTIEPMNFGDTLNFWAWRGQGET
LAFAGHTDVVPTGDENLWTHPPFDPVIRDGLLYGRGAADMKGSLAAMVIAAERFVTAHPD
HKGRLAFMITSDEEAKAINGTVKVVNALMARNERLDYCLVGEPSSTQHVGDVVKNGRRGS
ITANLRIHGIQGHVAYPHLADNPVHRSMAALQELVTTQWDEGNEFFPATSMQIANVQAGT
GSNNVIPGEFYVQFNFRFSTELTDIVIKQRVKELLDRHQLNYSIDWVLSGQPFLTARGAL
VDAVVNAVEFYNEITPQLLTTGGTSDGRFIAQMGAQVVELGPVNATIHKVNECVNAADLQ
LLSLMYQRIMEQLIA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgatctgccctgttattgatctggcccaacagttaatcagacgcccgtcccttagccct
gaagatgccggttgccaggacattatgatccaacggctacaggcgattggctttaccatc
gaaccgatgaattttggcgatacgctcaatttctgggcatggcgcggccagggtgaaacc
ctggcatttgctggtcataccgatgtggtgccaaccggagatgaaaacctgtggacccat
ccgccgtttgatccggtgattcgtgacggcctgttgtatggccgtggcgcggcggatatg
aaaggctcgctggccgcgatggtcatcgccgccgagcgttttgttacggctcaccctgat
cataaaggtcgcctggcctttatgatcacctcagatgaagaagcgaaagccatcaacggt
acggtgaaagtggtcaacgccctcatggcacgcaatgaaaggctggattattgcctggtc
ggtgagccatccagtacccaacacgtcggtgatgtggtcaaaaatggccgacgtggatcg
atcaccgccaatcttcgtatccacgggatacaaggccacgtcgcttatccacatctggcg
gataatccggtgcatcgcagcatggcagcgctacaggagctggttacgactcaatgggat
gaaggcaacgaatttttcccagccaccagcatgcaaatcgccaatgtacaagcgggtacc
ggcagcaacaacgttattcctggtgaattttatgttcagttcaattttcgttttagcact
gaattgactgatattgttattaaacaacgggttaaggaactgctggatcggcatcaatta
aattacagtatcgactgggtactgtctggccaacctttcctgacggcgcgtggtgcttta
gtggatgcggtagtgaacgccgttgagttctataatgaaataacgccgcagttgctcact
accggtggcacctctgatggacgttttatcgcacaaatgggcgcacaggtggttgagctt
ggcccggttaacgccaccattcataaagtgaatgaatgtgttaacgccgccgacctgcaa
ctgctcagcctgatgtatcaacgtattatggagcaactgattgcatga
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