Yersinia similis: BF17_01635
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Entry
BF17_01635 CDS
T03057
Symbol
recC
Name
(GenBank) exonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
ysi
Yersinia similis
Pathway
ysi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ysi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BF17_01635 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ysi03400
]
BF17_01635 (recC)
Enzymes [BR:
ysi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BF17_01635 (recC)
DNA repair and recombination proteins [BR:
ysi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BF17_01635 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AHK18208
UniProt:
A0ABM5PU10
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All DBs
Position
complement(269532..272903)
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AA seq
1123 aa
AA seq
DB search
MFTVYHSNQLDLLKALTTALIEREPLDNPFQQEVVLVQSPGIAQWLQMQLAQQFSIAANI
AFPLPATFIWDMFTRVLPDIPKESAFSKDAMTWKLMWLLPDLLENPLFSPMKRYLSDDGD
RRKIHQLAARVADLFDQYLVYRPEWLESWERGQLIEGLDDAQQWQALLWGELTRYTRQLE
QPEWHRANLYQRFIHQLLKSDVCPQGLPKRVFICGISALPPIYLQALQALGKHIDIHLMF
TNPCRYFWGDIQDYAFLAKLQSRKRRHYRESIELSLFRNPQQAEQLFNTDGEQNLSNPLL
ASWGRLGRDHMYLLSQIDEIQEVHAFVDIEPDNLLHGIQHDMLELEDHAVIGTTPETLTC
SDQKRRLDLEDRSLSLHVCHSPQREVEVLQDHLLGLLAADPELTPRDIIVMVADIDSYAP
YIQAVFGNAPSERYLPFAISDRKASQAHPALHAFITLLDLPQSRFTAEQVLALLEVPALA
TKFGITEDGLRRLRQWVGESGIRWGLDDDNVRELSLPATGQHTWRFGLTRMLLGYAMDSA
AGDWQGILPYDESSGLAAELAGQLADMLMHLSQWRQQLSQPRKLSEWLPICRQLLDTFFD
QDNDTEAVLVLIEQQWQKVIGYGIAAKYPDVVPLNLLRDELAARLDNERISQRFLAGPIN
FCTLMPMRSIPFKVVCLLGMNDGVYPRTLPPQGFDLMAKKVRRGDRSRRDDDRYLFLEAL
LSAQQQLYISYIGRSIQDNSKRYPSVLVSELIEYVAQSYHLPGDEKLSADGSAQRVMQHL
LCWHARMPFSAENFIKNSELQSYAAEWLPSAESKGHAHPDFNQPLQAEPLPEITLDELVR
FYRHPVRAFFQLRLGVNFVIEETELPDEEPFTLDNLSRYQFNTQLLNALIDEDDINRVFA
RARAAGVLPYGSFGELYWESQQDEMVPLAEQIRSERKENHSIELNIEFADTTVTGWIHQV
QDDGLVRWRPSILTAVDGLLLWLEHLVYCAAGGEGESRIYGRKGTAWRYAPMTADEARPY
LLQLIEGYQKGLCEPLMLLSKSGWAWLSQCFDRESGQILWDEETQGKARMKLLQVWQGDQ
RVTGEGEDHYIQRVCRRMDNQHLDMILYETERYLLPIARHNKA
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgttcacggtttatcattctaatcaattggatttactcaaagcgctcaccactgcgctg
atagaaagagaaccgttggataatcctttccagcaagaagtggtgttagtacaaagcccc
ggaatagcccaatggttgcaaatgcaactggctcaacagttcagtattgctgccaatata
gcgtttcctctaccggctacttttatctgggacatgtttactcgcgttctgcctgatatt
cctaaagaaagtgcattcagcaaagatgccatgacatggaaacttatgtggctactgcca
gatttattggagaacccactattttctcccatgaagcgttatttaagtgatgatggggat
cggcgtaaaattcaccagctcgcggcacgggtggcagatctttttgaccaatatctggtg
tatcgcccagaatggctggaaagttgggaacgtgggcaattgattgaggggcttgatgat
gcacagcaatggcaagcattactgtggggtgaactgacccgttatactcgccaattggaa
caaccggaatggcaccgggcaaacctctatcagcgttttatccaccaactactcaagtcg
gacgtttgcccgcaagggttaccgaaacgggtatttatttgtggtatatcggcgttgccc
cccatctatttacaggccctgcaagcattgggtaaacacattgatattcatttgatgttt
actaacccctgccgttatttctggggagatattcaagattatgctttcctcgctaaatta
caaagccgtaaacgtcggcattaccgtgaatcgattgaactaagtctgtttcgcaacccg
cagcaggcagagcaactatttaatacagatggtgagcagaacctcagtaacccactattg
gcctcatgggggcgattagggcgggatcacatgtatttgctctctcaaattgatgagatt
caagaggttcatgcttttgttgatatcgagccagataatcttttgcatggcattcaacac
gatatgctggagttggaagatcacgcagttattggcacaaccccagaaaccttaacgtgt
agtgatcaaaaacgccgattagatctggaggaccgctcacttagcttacatgtctgccac
agcccacagcgagaagttgaggtgctgcaagatcatttacttgggctattagccgcagat
cctgaattgaccccgcgcgacatcattgtgatggtggcggatatcgacagttatgcacca
tacattcaagctgtatttggtaatgctccgtctgagcgttatctgccgtttgcgatttct
gatcgcaaagccagccaggcacatcctgcgttacacgcctttattaccctacttgattta
ccccagagccgctttaccgctgagcaagtattggcactgttggaagtccctgccttagcc
accaaatttggtatcactgaagatggtttaaggcgcttgcggcaatgggtaggggaatca
ggcattcgttggggattggatgatgataatgtgcgggagttatccttgcctgcgacgggt
caacacacatggcgttttggcttaacccggatgctattgggttatgcaatggacagtgcc
gcaggggattggcaaggtatcctgccttacgatgaatccagtgggctggcagcagaactc
gccgggcaattggccgatatgctgatgcacctgagtcaatggcggcaacaattaagtcaa
ccccgaaaactcagcgaatggttaccaatatgtcgccaattattggatacgttcttcgat
caagacaatgatactgaagccgttctggtgttgattgaacaacagtggcagaaggtgatc
ggctacggtattgcagccaaatatccagacgttgtaccactcaatctgctacgagatgaa
ttggccgcacgtttagataatgaacgtattagccaacgttttctcgccgggcctatcaat
ttttgtaccttgatgccaatgcgttccatcccatttaaagtggtttgtctattgggcatg
aatgatggggtatacccgagaacgttgcccccacagggatttgatctaatggccaagaag
gttcgtcgtggtgaccgcagccgccgcgacgatgatcgctatttgttcctagaggctctg
ttatctgctcagcagcagctttatatcagctacattgggcgttctattcaagacaacagt
aagcgttatccttcagtgttggtaagcgaattaattgaatatgtcgcacaaagctatcat
ttacctggcgatgaaaagctcagtgctgatggcagtgctcaacgggtaatgcagcactta
ttatgttggcatgctcgtatgccattctccgctgaaaatttcattaaaaatagcgaatta
cagagctatgctgctgaatggctgccttctgccgagtccaaggggcatgcacacccagat
ttcaaccaaccgctacaggctgagccgctgcctgagatcacactagatgaattagtgcgt
ttttaccgacatcccgtgagagcatttttccaactgcggttaggggttaattttgttatt
gaagaaacagaattacctgatgaagagccatttaccttggataaccttagccgttatcaa
tttaatacccagctacttaatgcgctgatagatgaagacgatattaatagagtttttgcc
agagccagagctgccggcgtactgccttatgggtcttttggtgaactttattgggagagc
caacaagatgagatggtacccttggctgaacaaatccgcagtgaacgtaaagagaatcac
agtattgaactcaacattgaattcgcagataccacggttacgggatggattcatcaggtt
caggacgatggtttagtccgttggcggccatcaatattaaccgccgtcgatggcctttta
ttgtggcttgaacatctcgtgtattgtgcagcgggtggtgagggagaaagccggatatat
ggacgtaaaggaaccgcctggcgttatgcccccatgacggctgatgaagcccggccttat
ttactacaactcattgaaggttatcaaaaaggtttatgtgagccactgatgctcttgagt
aaaagtggatgggcatggttgagccaatgctttgatcgcgagtccggccaaattttgtgg
gacgaagagacgcaaggtaaagcacggatgaaacttttacaggtttggcaaggtgatcag
agagtcactggcgaaggtgaagaccactatatacaaagggtctgcagacgaatggataac
caacatttggacatgattttatatgaaactgaacgttatttattaccgatagctcgccat
aataaggcgtga
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