Yersinia similis: BF17_01720
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Entry
BF17_01720 CDS
T03057
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ysi
Yersinia similis
Pathway
ysi00300
Lysine biosynthesis
ysi00470
D-Amino acid metabolism
ysi01100
Metabolic pathways
ysi01110
Biosynthesis of secondary metabolites
ysi01120
Microbial metabolism in diverse environments
ysi01230
Biosynthesis of amino acids
Module
ysi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ysi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BF17_01720
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BF17_01720
Enzymes [BR:
ysi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BF17_01720
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AHK18224
UniProt:
A0A0T9PMJ1
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Position
complement(288964..290226)
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AA seq
420 aa
AA seq
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MPRALNDSSSALTAQNLIALPERFGCPVWAYDGDIIAERINQLRHFDVIRFAQKACSNIH
ILRLMREQGVKVDSVSLGEIERALHAGYQPGQEPAEIVFTADLLDQATLLRVTELNIPVN
AGSIDMLDQLGQQAPGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWHEELPRAIKKIEH
YGLTLVGIHMHIGSGVDYQHLEQVCDAMVQQVITLGQDISAISAGGGLSIPYQFGDDVID
TEHYYGLWNSARERIAAHLGHPVSLEIEPGRFLVAESGVLIAQVRAVKDMGRRHYVLVDA
GFNDLMRPAMYGSYHHISLLPADGRDLTSVPLIDTVVAGPLCESGDVFTQQEGGGVETLA
LPAAVIGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFEKGQPRLIRRRQTIEELIDLERV
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgccacgcgcactgaatgacagttcttcagcactgactgcccaaaatctgattgccttg
cctgagcgttttggttgcccggtgtgggcctatgatggtgatattattgctgagcgtatt
aatcaattacgccattttgatgttatccgcttcgcgcaaaaagcctgttcgaatatccat
attctgcgcctgatgcgtgagcaaggcgttaaggttgattcggtatctttgggtgaaatc
gagcgtgcattgcacgcgggttatcaaccagggcaggaacctgccgaaattgtcttcacg
gctgatttactggatcaagcgacattattacgtgttactgaattgaatatcccggtaaat
gccgggtctatcgatatgttggatcaactggggcagcaggctccgggtcaccctgtttgg
ctgcgcgtcaatccgggctttggtcatgggcatagccagaaaaccaatactggcggtgaa
aacagcaaacacggcatttggcatgaagaactccctcgtgcaatcaagaagattgaacac
tatggtttaacactggtggggattcatatgcacattggctcaggtgtcgattatcaacac
cttgagcaagtctgtgatgccatggttcagcaagtgattaccttagggcaggatatcagt
gctatctccgctggcggtgggttatcgatcccctatcagtttggcgatgatgtgattgat
actgaacactattatgggttatggaatagcgccagagagcgaattgctgctcatttgggc
cacccggttagccttgaaattgaaccaggccgcttcctggtcgcagagtcaggtgtattg
atcgctcaggttcgtgctgttaaggatatggggcgccggcattatgtcttggttgatgcc
ggatttaacgatctgatgcgcccagcgatgtatggcagttatcaccatatttcattgctt
cctgcggatgggcgcgacctgacgtcagttccgctgattgataccgtggttgctggccca
ctttgtgaatctggcgatgtcttcactcagcaagagggcggaggcgtggagacccttgct
ctgcctgctgcggtcattggcgattatctggtcttccatgatacgggcgcttacggcgct
tcgatgtcatctaactacaacagccgcccgttattacctgaagtgctgtttgaaaagggc
caaccgcgcttgatccgccgccgtcaaactattgaagaattgattgacttggaacgcgtt
taa
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