Yersinia similis: BF17_07020
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Entry
BF17_07020 CDS
T03057
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ysi
Yersinia similis
Pathway
ysi00040
Pentose and glucuronate interconversions
ysi01100
Metabolic pathways
ysi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ysi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
BF17_07020
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BF17_07020
Enzymes [BR:
ysi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
BF17_07020
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Motif
Pfam:
Pectate_lyase_2
Motif
Other DBs
NCBI-ProteinID:
AHK19096
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Position
complement(1450177..1451895)
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AA seq
572 aa
AA seq
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MKKRALVLSMSVLAMLYIPAGQAAETDRLTVVKQYVDNVLNKASDTYHGDKPSPLLADGV
DPRTGQQMEWIFPDGRRAVLSNFSAQQNLMRVMSGLSELSGDPQYQKRAEDIVRYHFQNY
QDNGGLLYWGGHRFVDLKTLQPEGPSEKEKVHELKNAYPYYDLMFSVDSDATTRFIRGFW
NAHVYDWRILETSRHGEYGKPMGTLWESTFEQQPPFFATKGLSFLNAGNDLIYSASLLYK
YQQDQGALVWAKRLADQYVLPRDAKTGLGVYQFTQALKREEPTDDADTHSKFGDRAQRQF
GPEFGPTALEGNMMLKGRTSTLYSENALMQLQLGKDLGGQGNDLLKWTVDGLKAFAKYGY
NEQDNTFRPMIANGQDLSNYTLPRDGYYGKKGSVLKPYKAGNEFLISYARAYAIDNDPLL
WKVARGIASDQGLGDIGSAPGKEMKVKLETTNSDPYALFALLDLYNASQVAEYRSLAEKV
ADNIIKTRYIDGFFMASPDRQYADVDAIEPYALLALEASLRNKPQAVAPFLNGAGFTEGA
YLMDDGSARISTRDNELFLLNVGETLQPNGRK
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagagcattagtgttgagtatgtcagtgctggcaatgctgtacatccccgcc
gggcaagccgcagagacagaccgtctcactgtggttaagcaatatgtcgataatgtactg
aacaaagcgtcggatacttatcacggtgataaaccgagcccattgctggctgatggtgtt
gacccccgtaccgggcagcaaatggagtggatattccctgatggccgtcgtgctgtgcta
tccaacttctctgcacaacaaaatctgatgcgggttatgagtgggttgagtgaacttagc
ggtgatccgcagtaccaaaaacgtgctgaagatatcgtgcgctaccatttccaaaattat
caagataatggtggtttgctctactggggcggtcaccgttttgttgatctgaaaaccttg
cagccggaagggccgagtgagaaagagaaagtacatgagctgaaaaatgcttatccctac
tatgacctgatgttcagcgttgatagtgacgcgactacccgttttattcgcggtttttgg
aatgctcatgtgtatgactggcgtatccttgaaaccagccggcacggtgaatacggtaag
ccaatggggacattgtgggaaagtacgtttgaacagcaaccccctttctttgccaccaaa
ggactcagtttccttaacgccggtaatgacctgatctattctgcttccctgctgtataag
tatcagcaagatcagggcgcattggtgtgggcaaaacgtttggctgatcagtatgtgttg
ccgcgagatgccaagacgggcctcggtgtttatcagttcactcaggcactgaaacgcgaa
gagccaacagatgatgcggatacccattccaagttcggcgaccgtgcgcagcggcagttc
ggaccggagttcgggccaacggcgcttgaaggcaatatgatgctcaaagggcgcaccagt
accctttattctgaaaacgccttgatgcaactgcaattgggtaaggatttgggggggcag
ggtaacgatttactgaaatggactgtggatggcctgaaagctttcgctaaatatggctac
aacgaacaggacaatacgttccgtccgatgatcgccaatggtcaggatttatcgaattat
actctgccacgtgatggttattacggcaaaaaaggatcggtactcaagccttataaggcg
ggtaacgagttcctgatttcctacgctcgcgcttatgctatcgataacgaccccttactg
tggaaggtggctcgcggtattgccagcgatcaggggctgggcgatatcggcagtgcgcca
ggtaaagagatgaaggtcaaactggagaccactaatagtgatccgtatgcgctgtttgct
ttgctggacctctacaatgccagccaggtcgctgagtaccggtctttagctgagaaagtt
gctgataacattattaagactcgttatatcgacggtttctttatggcttcaccggatcgg
caatatgccgatgtggacgctatcgagccttacgctttgctggcattggaagcatcattg
cgtaacaaaccacaagcagttgctcctttcctgaatggtgctggttttaccgaaggtgct
tacctaatggacgacggttcagcccgaatttctacccgcgacaatgagctgttcttgctt
aatgtgggtgaaacgttgcaaccgaacggccgtaaatag
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