Yersinia similis: BF17_07425
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Entry
BF17_07425 CDS
T03057
Name
(GenBank) selenocysteinyl-tRNA-specific translation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
ysi
Yersinia similis
Brite
KEGG Orthology (KO) [BR:
ysi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ysi03012
]
BF17_07425
Translation factors [BR:
ysi03012
]
Eukaryotic type
Elongation factors
BF17_07425
Prokaryotic type
BF17_07425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
bact_SelB_WH_2nd
SelB-wing_1_3
SelB-wing_3
SelB-wing_2
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
SRPRB
Motif
Other DBs
NCBI-ProteinID:
AHK19161
LinkDB
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Position
complement(1536447..1538441)
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AA seq
664 aa
AA seq
DB search
MIIVTAGHVDHGKTTLLQAITGVNADRLPEEKQRGMTIDLGYAYWPLPDGRIMGFIDVPG
HEKFLANMLAGVGGIDHALLVVACDDGVMAQTREHLAILRLSGRPALTVALTKADRVDDE
RIAQVRQQILQELVAQGWLVEQVTLLVTAAVTDRGIGELREHLAQCHQKSAQNGRLQRRF
RLAIDRIFSVKGAGLVVTGTALAGEVAVGDTLWLAGGDCPVRVRGIHAQNQPAQQAQAGQ
RIALNISGDISKQQINRGDWLLAQPPLPPVDRVLVTVDADTPLQHWQPLHLYHGARHITG
RFSLLGHQQLIDDQQQLIDDQQQLIDDQQPLIGHQQIINNQSTSGGQSSQILAELLLDSP
LWLVENDRVILRDIGAKKTLGGARVIHLAVPPRGKRQPAYLAWLTALAQATSDREVLDLH
LAQGPVSVRTFSWARQLTDNEMAALLAATDTVVAGDIALSHPHAQQAQQTLLHVLTLYHQ
QHGDQLGLGRARLRRMALPTLDEGVVFRLIDNLLVEGALHNTRGWLHLPEHGLAFTEQEQ
IGWQQAVPYFVDDPWWVRDLAAELQAEEGEMRSLLRKAAQLGYITAVVTDRYYLSQRIEQ
LADLVRELDSRQGSVSAADFRDRLGIGRKLAIQILEFFDRSGFTRRRGNGHILRDSGLFS
AIGS
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgattattgtcaccgcaggccatgtcgatcatggcaaaaccacactgttacaggccatt
accggcgtcaatgcggatcggttgccggaagagaagcagcgggggatgaccatcgatctg
ggctatgcctactggccacttcctgatggccgtatcatgggttttattgacgtgcccggt
catgagaagtttttggctaacatgttggcgggggtgggcggtattgatcacgctctgttg
gtggtggcctgtgatgatggcgtgatggcgcagacccgtgaacatctggcgattttgcgg
ctgagtggccggccagcgctaacggtggcattgaccaaagcggatcgggttgatgatgag
cgcattgcacaggttcgtcagcagattttgcaggagttggttgcacagggctggctggtg
gagcaggttaccctacttgtcacggcggcagtaactgatcggggtatcggtgagttacgt
gagcatctggcgcaatgtcatcagaaaagtgctcagaatggccgattacagcggcgtttt
cgtctggctattgaccggattttcagcgtgaaaggggccggtttggtggtgacggggacg
gcattggcgggcgaggtggcggtcggggataccctgtggctggctggcggtgattgcccc
gtgcgggtgcgaggtattcatgcccagaaccaaccggcacagcaggcgcaagccggccag
cgcattgccctgaatatcagtggtgatatcagtaagcagcaaattaaccgcggtgattgg
ttattggcgcagccgccgctgccgccggtggatcgggtgttggtaaccgttgatgcagat
acgccgttacaacactggcagcccttacatctgtatcatggggcccgccatattacgggc
cgtttttcactactaggtcaccaacagttaattgacgaccaacaacaattaattgacgac
caacaacaattaattgacgaccaacaaccgttaatcggccatcaacaaatcataaataat
caatccacatcaggcggtcaatcctctcagattttggcagagttgctgctggacagccca
ctgtggctggtggaaaacgaccgggtgatcttgcgtgatatcggtgcgaagaaaaccttg
ggtggcgcacgggtgattcatctggcggtgccaccacgtggtaaacggcaaccggcgtat
ttggcttggttaactgcactggcccaggcgacgagtgatcgggaggtgttggatttacat
ttggcgcaagggccggtctccgtgcgcacgtttagttgggcgcgccagcttactgacaat
gagatggcggcattactggcggcgaccgatactgtcgttgccggggacattgcgctatca
catcctcacgcacagcaagcgcaacaaaccctcttgcatgtattaaccctctatcaccaa
cagcatggcgatcagttggggttagggcgggcgcgtttgcgacgtatggctttaccgact
ctcgatgagggggtggtattccgtctaattgataacttgctggtggagggagcattacac
aacacccgtggctggttacatctgccagaacatggtttagcgtttactgagcaagagcag
atagggtggcaacaagcggtgccttactttgttgatgacccttggtgggtacgtgattta
gcggccgagttgcaggctgaagagggcgaaatgcgcagcctattacgtaaagcggcgcaa
ctgggttatatcaccgcggttgtgacggatcgttattatctgagccaacgtattgagcaa
cttgctgatttggtccgtgagttagatagccgccaggggagtgtcagtgccgcagatttc
cgtgatcgactcggtattggccgtaaactggcgatccaaattcttgaattttttgatcgc
agtggtttcactcgccgccggggtaatggccatatattgcgagatagcggcctgttttct
gcgataggttcttga
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