Yersinia similis: BF17_09545
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Entry
BF17_09545 CDS
T03057
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
ysi
Yersinia similis
Pathway
ysi00730
Thiamine metabolism
ysi01100
Metabolic pathways
ysi01240
Biosynthesis of cofactors
Module
ysi_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
ysi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
BF17_09545
Enzymes [BR:
ysi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
BF17_09545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AHK19523
UniProt:
A0ABN4CMV4
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Position
complement(1973868..1975931)
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AA seq
687 aa
AA seq
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MSNNTTSLSAENSSPPRKGIPIRKKQREEAQQFINTLQGVTFPNSQRIYLQGSRPDIQVP
MREIQLSPTQIGGSKNEPRYEDNEAIPVYDTSGPYGDPQAKLDVHNGLPKLRAAWVADRQ
DIEALASVSSGFTQQRLADEGLDHLRFEHLPRPQKAVTGKCVTQLHYARQGKITPEMEFI
ALRENMGRERIRGEVLLQQHPGQAFGAHLPENITAEFVRQEVAAGRAIIPANINHPESEP
MIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILR
NSPVPIGTVPIYQALEKVNGVAENLTWEMFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTA
KRLTGIVSRGGSIMAKWCLSHHKENFLYQHFREICQICATYDVSLSLGDGLRPGSIQDAN
DEAQFAELHTLGELTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPL
TTDIAPGYDHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAAD
LAKGHPGAQIRDNAMSKARFEFRWEDQFNLALDPATARAYHDETLPQESGKVAHFCSMCG
PKFCSMKISQEVRDYAAAQEQAATQAQAATPTTAVQSIEVAQAMKVAQPINILQSGMEKM
SAEFRSRGSELYHRPANLSTGANNEPT
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataatacaacgtcattatccgctgaaaattcgtcacccccacgtaaaggcata
cctattcgtaaaaaacagcgcgaagaggcccaacagtttattaataccttacaaggcgtt
acttttcccaattcccaacgtatttatctacaaggctcacggcccgatattcaggtgcca
atgcgtgagatccaactcagcccgacgcaaatcggtggcagtaaaaacgaaccacgctat
gaagataatgaggctatcccggtttatgacacctccggtccctatggtgacccacaagct
aaactggatgttcacaacgggctgcctaaactgcgtgccgcttgggttgctgatcgccaa
gatatcgaagcgctggcatctgtcagttccggttttacccaacaacgtttggctgatgaa
ggtctggaccatttacgttttgagcatctgccccgcccacagaaagcagtcactggcaaa
tgtgtgactcagttgcattacgcccgacaggggaagatcactccagaaatggagtttatc
gccctacgggaaaatatgggccgtgaacgtattcgtggtgaagtattgcttcaacaacat
ccgggacaagcgtttggtgcccatctgccggaaaatatcaccgccgagtttgtgcgtcag
gaagtggctgcgggtcgggctatcatccccgccaatattaatcacccagaatctgaaccg
atgattattggccgtaattttctggtcaaagtgaatgccaacatcggtaattccgccgtg
acatcttccattgaagaagaggtggaaaaactggtctggtctacccgctggggggccgat
acggtgatggacttatctacgggtcgctatattcatgaaacgcgggaatggatcctacgt
aacagcccggtccctattggcacagtacctatctatcaggcgctggaaaaagttaatggc
gtggccgaaaatctgacgtgggaaatgttccgtgacaccctgttagagcaggcagagcaa
ggggtagactattttactatccacgcaggggtcttgttgcgctatgtaccgatgaccgcc
aaacgcctaaccggtatcgtctctcgcggcggttcaattatggcaaaatggtgcctttct
catcataaggaaaacttcctgtatcagcatttccgcgaaatctgtcaaatttgtgcaacc
tatgacgtttcattatcactgggcgatggccttcgccctggttctattcaggatgccaat
gatgaagctcaattcgccgaactgcatactttgggtgaattgaccaaaatcgcctgggag
tatgatgtacaggtgatgatcgaaggcccagggcatgtgccgatgcagatgatccgccgc
aatatgaccgaggagctggaacactgccacgaagcgccgttttataccttaggcccactg
accacggatatcgcaccgggctatgaccactttacctcagggattggtgcagcgatgatc
ggctggtttggttgtgccatgctctgttatgtcacccccaaagaacacctcggcctgccg
aataaagaagatgtgaaacaagggcttattacttacaaaattgccgcgcacgccgcagat
ttggccaaaggccaccccggagctcagatccgtgataacgccatgtcaaaagcccgcttt
gaattccgctgggaagatcagtttaatttggcgctcgatccagcaacagcccgcgcttat
cacgatgaaaccctgccgcaagagtccgggaaagtcgctcacttctgttccatgtgcggc
ccgaaattctgttcaatgaaaatttcacaagaagtccgcgactatgctgctgcacaagaa
caagcggccacacaagcacaagccgctacaccaaccacagcagtacaatcgatagaagta
gcacaggcaatgaaagtagcgcagccaattaatattctgcaatcagggatggaaaaaatg
tcggccgagtttcgctcccgtggcagtgagctatatcaccgcccggcgaatctgagtaca
ggggccaataatgaaccaacttga
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