Yersinia similis: BF17_11620
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Entry
BF17_11620 CDS
T03057
Name
(GenBank) transcriptional regulator SgrR
KO
K11925
SgrR family transcriptional regulator
Organism
ysi
Yersinia similis
Brite
KEGG Orthology (KO) [BR:
ysi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ysi03000
]
BF17_11620
Transcription factors [BR:
ysi03000
]
Prokaryotic type
Helix-turn-helix
Other families
BF17_11620
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SgrR_N
SBP_bac_5
HTH_Crp_2
HTH_11
HTH_Mga
HTH_65
Rrf2
Sigma70_r4
HTH_29
HTH_36
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AHK19878
LinkDB
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Position
complement(2430304..2431965)
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AA seq
553 aa
AA seq
DB search
MSTSRLQQQFIRLWQRYNGQSTETTLQALAEVLNCSRRYVRSLLGKMQQAGWLDWQAEAG
RGKRSQLIFLRSGLALQQQRAEELLEQDHIDQLVQLVGDKKAVRQMLLSQLGRSFRQGKH
ILRVLYYRPFENLLPGTALRRSETHMVRQIFNGLTRINEENGELEPDLSHHWQAITPLHW
RFYLRPAIHFHHGRELEMSDVISSLTRLIPQPLFSHITEVRSPTPYVIDVYLRSPDHWLP
WLLGSVHAMILPQEWETQPDFHRQPIGTGPYSVIRNHHSQLKIQAFDNYFGFRALIDEVN
IWVLPELSEELVYSGVQLQADDTGKNKLESRLEEGCYFLLFDQRSPQACTPEIRRWLCEL
ITPIALLSHADPFYQRYWSPAYGMLPRWHHNRLTTQEPKPEELTELTLTFYSEHSEFDAI
SQTLTKLLAAQGVMLKIQVLDYTRWYQGDAQSDIWLGSANFYLPLEFSLFSTLYELPLLQ
HCLNEELHQDIESWRNNTLLMADWCQRLVSQHQFHPLFHHWLELYGQHSMRGVRMNTLGW
FDFKSAWFTPPEA
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgtctacttcgcgcctgcaacaacaatttattcgtctctggcaacgctataacggccag
tcaacggaaaccacattgcaggcgctggcagaggtacttaattgttcacgccgctatgta
cgttctctgctgggcaagatgcaacaagcgggctggctcgactggcaggctgaagctggc
cgaggaaaacgctcacaattgatcttcttgcgttccgggctagcgttgcaacaacaacgg
gctgaagagttgctcgagcaggatcatattgatcagttagtccagttggtcggcgataaa
aaagcggtacgccaaatgttgctatcccagttgggacgtagcttccggcaaggaaaacat
attctgcgggtgctctattaccgcccattcgagaacttattacccggcacggccctacgc
cgatctgaaacccatatggtgcggcaaatttttaacgggctgacacggataaatgaggaa
aatggggaactcgaaccagacttatctcatcactggcaagctatcactcccttacattgg
cgcttttatttgcgaccagccattcatttccaccatggacgagaactggaaatgagtgat
gtgattagcagcctgacccgcctgatcccccagcccctgttttctcatattacggaggtg
cgttcaccgacaccttatgtgattgatgtttatctccgttcgccagatcactggttgcca
tggctactgggcagcgttcacgcgatgattttgccgcaagagtgggaaactcagcccgat
tttcaccggcagcctattggtaccggcccctattccgtgatccgcaatcatcacagccag
ttgaaaattcaggcattcgataactattttggtttccgagcactgattgacgaggtcaat
atctgggtgctcccagaactctcagaagaattggtgtattccggggtacaattgcaagcc
gacgataccggtaaaaataagctggagagccgtttagaggaaggttgctacttcttactg
ttcgaccagcgctcccctcaggcctgcaccccggaaatccgccgttggttatgtgagttg
atcacaccgatagcgctactcagccacgcagaccccttttatcaacgttattggtcaccg
gcctatggcatgttaccacgctggcaccataaccgactgaccactcaagagccaaaaccc
gaagagctgaccgagctaacactgacgttttacagcgaacattcagagtttgatgccatc
agccagacactcacaaaattattggccgctcagggcgtgatgttaaagatacaggtcttg
gactacacccgctggtatcagggggatgcacaaagcgatatctggctcggcagtgctaac
ttttacttgccactggagttctcactattttccaccctctatgaattgccactgctacaa
cattgtctgaacgaagaactgcatcaagatattgaatcctggcgtaataacactttactc
atggccgattggtgccaacgactggtaagccagcatcaattccatccgctatttcatcat
tggttagaattatacggtcaacacagtatgcggggagtgcgtatgaatacactcggctgg
tttgattttaaatccgcatggtttaccccaccagaggcatag
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integrated database retrieval system
