Yersinia similis: BF17_12985
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Entry
BF17_12985 CDS
T03057
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ysi
Yersinia similis
Brite
KEGG Orthology (KO) [BR:
ysi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ysi03400
]
BF17_12985
DNA repair and recombination proteins [BR:
ysi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BF17_12985
Archaeal homologous recombinant proteins
BF17_12985
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FBPase_2
DUF3926
Terminase_3
Metallophos_3
Motif
Other DBs
NCBI-ProteinID:
AHK20127
UniProt:
A0ABM5PYQ5
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All DBs
Position
complement(2748005..2749249)
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AA seq
414 aa
AA seq
DB search
MRIIHTSDWHLGQYFFTKSRAAEHQAFLHWLIEQIKEHQVDALIVAGDIFDTGAPPSYAR
ELYNRFIVELQPTACQLVVLGGNHDSVATLNESRDLLSYLNTTVISCASSDLEQQVIILK
NRQQQPAAVLCAIPFLRPRDLVTSQAGESGGQKQLALQEAIAGHYQTLYQRALELRSQLG
LPLPIIATGHLTTVGVTTTDSVRDIYIGTLDAFPAQAFPPADYIALGHIHRAQQVAKTEH
IRYSGSPIALSFDELNKEKSVYLVEFDQQNLSSVTPLFIPQFQPMQLIKGDLCQIEQQLA
AFAGHEGLPVWLDIEVATQDYLTDIQRRIQALAADLPVEVVLLRRSKEQRNNSIHRQEKE
TLNELTVSDVFERRLALEADLPAPRQQRMRQMFNYVVDEIAQDGSNDAVEEPAQ
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattattcatacctctgactggcatttggggcagtattttttcaccaaaagccgt
gctgctgaacatcaagcatttctgcactggttgattgagcagattaaagaacaccaggtt
gatgcgctgattgtcgcaggggatatttttgataccggtgccccgcccagctatgcccgt
gagctatataaccgttttattgtcgagctccagcctaccgcctgtcaattagtggtgcta
ggtggcaaccatgattcagtagccacactaaatgaatcacgagatttactttcatacctg
aataccacggtaatctcgtgtgccagtagtgatctggaacaacaagtgattatcttgaaa
aatagacagcagcaacccgcagcggtgctatgcgccattccgtttttacggccccgtgat
ctggtgaccagtcaagcgggtgaatctggtggtcagaaacaactggcattacaagaagct
attgctggccactatcaaacgttatatcaacgcgccctagagctgcgatctcagcttggc
ttgcctctgcccattatcgccaccgggcacctgaccaccgtgggtgtgacaactacagac
tcagtacgagacatttatattggtacactagatgcctttccggctcaggcttttccgccc
gctgattacattgcccttggtcatatccatcgcgctcaacaggtcgctaaaactgaacat
atccgctacagcggctcacctatagcgctcagttttgatgaactaaacaaagagaaaagt
gtgtatttggtggagtttgaccagcaaaatctgtcatcagttaccccactcttcattcca
caatttcaaccgatgcaattgatcaaaggtgatttgtgccaaatagagcagcaattagct
gcatttgctggccatgaaggcttacccgtatggttagatatagaagtggcaacccaagac
tatctcactgatatacaaagacggatccaggcactggcagcggacttgcccgttgaagtg
gtattactgcgccgtagtaaagagcaacgcaataacagcatccaccggcaggaaaaagag
acgctaaacgaattgaccgtcagtgacgtatttgaacgtaggctggcactcgaggcagat
ttacccgcgcctcgccagcagcgaatgcgccaaatgttcaattacgttgttgatgaaata
gcgcaagatggcagtaacgatgcggtggaggagccagcccaatga
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