Yersinia similis: BF17_13650
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Entry
BF17_13650 CDS
T03057
Name
(GenBank) recombinase RecF
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ysi
Yersinia similis
Brite
KEGG Orthology (KO) [BR:
ysi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ysi03400
]
BF17_13650
DNA repair and recombination proteins [BR:
ysi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BF17_13650
Archaeal homologous recombinant proteins
BF17_13650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
ABC_tran
TIP120
TorS_sensor_domain
YgaB
AAA_27
Motif
Other DBs
NCBI-ProteinID:
AHK20245
UniProt:
A0ABN4CN19
LinkDB
All DBs
Position
complement(2898426..2900759)
Genome browser
AA seq
777 aa
AA seq
DB search
MNWQISKIEVSSFKAFKHIYLDLGESSLLTLDGPNGYGKTSIFDAIELLFTGQISRIQNL
FNTLLTRNKRDYADNLFWNNRSGENDLCIKIEFTNDGRKLVLARHCQAAIFKKPVNNRAD
KYENFKLYELPEFESSNFTKINLRDNNFLDEIFGKNFRENFSFLNYLEQGQNRLLYTRVD
ERKDKLGNLFNISDIEAEIESCNTIYSKLTKYINNPERTTKAVSLKEEIATLKNTLQAEA
GIIEYKKLSTTDVQPGWDKEILFSTYSVVDYAAYQQSVRKIIALLPLKSTITTRVHNETI
DADIDRNEESLRSLARFGKDLGKLDGLEDIKKEIDELERSANIIKRGATVIKVEEARSLP
NWEDGRLEWFELQIESRNRLGEKSSTNANVVAELERLKKQLLEEHKKYYPDDHLCPLCGA
DWEDHKSMVDTIEARTKQISDSLSQDGRDLVNLTTAMNAELKRINTHIQDSLKLLTPTFE
PNLHAALTRIKLQLPAITQLLEKLQSENIQIIDSFTEIEEVVGERLERLKEILRNKKQVE
ADALALPEDWRETINSAFKDLLDFYIITAEDLKDKEQYISIKANEAQSFRLQTCVTDLKL
IEKEILAAQKAQGKIEKLRSTLKKTEQRYTDQTISAIELIFHIYSGRLIQNYQRGLGLFI
ESREGTQLRFLTAEKSEHDAVMFMSSGQVSALSLAFFLSLNKVYARVPLILIDDPSQSLD
EVNVASLTDLLRCELKHCQLVVSSHEDDISAYMRYRFDRAGLTTSSLNMQLLAKEAS
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgaactggcaaatatccaagattgaagtctctagcttcaaagcattcaagcatatctac
ttagatcttggcgagtcgtccttactaactctggacggccctaacggttatggcaaaaca
agcatcttcgacgcaatcgaactactgttcaccggccagatcagtcgaatacaaaatcta
ttcaatacattattaaccaggaacaagagagactacgcggataatctcttctggaacaat
cgctccggcgagaacgacctctgcattaagattgaatttactaatgatggtcgcaaactt
gttttagccagacattgccaagctgcgatattcaaaaaaccagtaaacaatcgtgcagac
aaatacgaaaacttcaagctttacgagctaccagaattcgaatcatctaacttcacgaag
atcaatctgcgcgacaacaacttccttgacgaaattttcggaaaaaattttagggaaaac
ttctccttcctcaactatctggagcaaggacaaaaccggctgttatacactcgggtagac
gaacgtaaggataaactaggaaacctctttaacatcagcgatatcgaagccgagatcgaa
agctgcaacaccatatacagtaaactcacaaagtacatcaacaatcctgaacgcacgaca
aaagcagtatcacttaaagaagagatagctaccctaaaaaacacattgcaggcagaggct
gggatcattgagtacaaaaagctctcgacgactgatgtccaaccaggatgggacaaggag
atactgttctcaacgtattcagtggtagactatgcagcctaccagcaatcagttcgcaag
attattgcccttctgccactcaaatccacgataacaaccagggttcacaacgagacaatc
gatgccgacatcgatcgtaatgaagaatcgctgagaagcttggctcggttcggtaaagac
cttggcaagcttgatgggcttgaagatatcaagaaggagattgatgaattagagcgctca
gcaaacatcatcaaacgcggtgccacggtcatcaaggtcgaagaagccagatcactacca
aactgggaggatggacgccttgagtggtttgagttacaaattgaatcccgaaacagacta
ggagaaaaaagcagcaccaacgcgaacgtcgtagccgaattggaacgcctgaaaaagcag
ctgcttgaagaacataaaaaatactatcccgacgatcatttgtgccctctctgtggcgct
gactgggaagatcacaaatcaatggtggataccattgaagcaagaactaagcagatctct
gattcgctaagccaggacggtagggacttagttaaccttaccactgctatgaacgctgag
ctgaaacgcatcaacacccacatacaagacagcctgaaacttctcacacctacatttgaa
ccaaatcttcatgcagcactgacgagaattaagcttcagctcccggcaataacccaacta
cttgagaagctacaaagcgaaaacattcaaattattgactcatttacggaaattgaggaa
gtagtaggtgagcgacttgaaaggctcaaggagattctaagaaataaaaaacaggttgaa
gctgatgctttagcgctaccggaggactggcgagaaacaataaacagcgccttcaaagac
ctgctggacttctacataatcacggctgaagaccttaaggacaaagagcagtacatatcg
attaaagctaacgaggctcaaagcttcaggctccaaacctgcgttaccgatcttaagctt
atcgaaaaagaaatcctggcagcccaaaaagcacaaggtaaaatcgaaaagctccgcagt
acactgaaaaagacagagcaacgttataccgaccagacaatttcggctattgagctcata
ttccatatctacagtggccgactgatccaaaactatcagcgtggtctgggtctgtttatc
gagagccgcgaaggtacgcagttgaggttcctgactgccgagaaatctgagcacgacgca
gttatgttcatgagttctggtcaagtgtccgccctcagccttgccttcttcctctctctc
aacaaggtctacgctcgggtgcctctcatcctgattgatgatccgtcgcaatccctggat
gaagtcaacgttgcttccttgaccgacctactccgttgcgaactcaagcattgtcaatta
gttgtctcctcccacgaggacgatatctcggcctatatgcgctaccggtttgacagagcc
ggtttgacaacaagttcgctcaacatgcagctcttggcgaaagaagcttcgtaa
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