Yersinia similis: BF17_16270
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Entry
BF17_16270 CDS
T03057
Name
(GenBank) peptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
ysi
Yersinia similis
Brite
KEGG Orthology (KO) [BR:
ysi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ysi01002
]
BF17_16270
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ysi01011
]
BF17_16270
Peptidases and inhibitors [BR:
ysi01002
]
Cysteine peptidases
Family C82
BF17_16270
Peptidoglycan biosynthesis and degradation proteins [BR:
ysi01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
BF17_16270
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
AHK20680
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Position
3426627..3428483
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AA seq
618 aa
AA seq
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MSMIKRKLQRALVLYCALVCSLMTAFTASAAAPVMPVDSSSALPARGATMSVAQSRSQLL
AALPKDVVPLYASELASLYAANQMQPMWQDRVAVQRFQQQLAEVGLSGIQPQFMQWVKWL
SEPEITGMARDIILSDAMLGYLHFISGVGANGSVWLYSNVPYKMAMPPAAILNAWQKAVN
EGSTASYLASLAPQHPQYDKMQQALKLMLADRRPWPQMPTGPSLRPGQLSNDIPALREIL
DRTGMLHPVTPVKAPEVIPVENPTVAVVNDDLSVDEEKNRTQTNSLVVSPSAVPAPESDD
AASVHTPSVSVVTLTDNIYTPELVEAVKRFQQWQGLTDDGVIGPRTREWLNVSPQTRATL
LALNIQRLRILPGHVDNGIMVNIPNYSLNYYKDGAEVLSSRVIVGRPSRKTPLMSSALNN
VVVNPPWNVPTSLVRQDIVPKARNDAGYFQRNGYTVLSGWSNDAEVINPSMIDWSIISPN
NFPYRLRQAPGANNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDL
ANMLLQDAGWNDARVSSKIKQGDTTYVNIRQRVPVQLYYLTAWVAEDGKPQFRTDIYNYD
KMVRSGAQISQQAEFLLQ
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgataaaaagaaagttacaacgcgcactcgttttatactgcgctttagtttgc
agcctgatgaccgcgtttaccgcatcagcggctgcccccgtaatgcctgtggattcatct
tcagctttgccagcacgtggtgcaaccatgtcagtggctcaaagccgttcgcaattattg
gccgcgcttccaaaagatgtcgtgccactctatgcctcggaattagcgtcattatatgcg
gcgaaccaaatgcagcctatgtggcaagaccgggttgctgttcaacgttttcagcaacag
ttagcggaggttggcctttcaggcattcaaccgcagtttatgcaatgggttaaatggctg
agcgagccagaaatcaccggtatggcgcgtgatattattctatcggatgcgatgctgggt
tatttacactttatttccggtgtcggtgctaatggcagtgtttggctatacagtaatgtg
ccttacaaaatggccatgccgcctgcggcgattttaaacgcctggcagaaagcggtaaat
gaaggttcgacagcctcttatctggcgtcgttggctccgcagcatccgcaatacgataaa
atgcaacaggcgttgaagttgatgctagcagaccgacgcccgtggccacagatgcccact
gggccaagtttacgtccggggcaacttagcaacgatatccctgcattgcgggaaattctt
gatcgaacgggtatgttgcacccagtaaccccggtgaaagcgccagaggtgattcctgta
gagaaccctacggtggccgtagttaatgatgatctctctgttgatgaagaaaaaaatcgc
actcagactaacagcttggtggtcagcccatcagccgtccccgcccctgagagcgacgat
gctgcatccgtacatacgccctcagtgagcgtggttacgctaactgacaatatctataca
cctgagttggtagaagccgttaaacgcttccagcaatggcaggggctcactgatgacgga
gttatcggccctcgtacccgcgaatggttgaatgtttcgccacaaacgcgggccacgtta
ttggcattgaacatccagcgattacgtattttgcctgggcatgttgataacggcattatg
gttaatatcccaaactactctctgaattattataaagatggggccgaagtgctttcatct
cgggtgattgttggccgtccaagtcgcaaaactcccctgatgagcagtgctttgaataat
gtggtggtgaacccgccatggaacgtaccgacctcattggtacggcaggatatcgtgccc
aaagcacgtaacgatgccggttatttccagcgtaatggctataccgtgttgtccggatgg
agtaatgatgctgaagtgatcaatccttctatgattgactggagcattatctcgccgaat
aacttcccttaccgtttgcgtcaggcaccaggtgccaataactcgttagggcggttcaaa
tttaacatgccaagttccgacgctatttatttacatgacacgccgaatcatggcctgttc
cagaaggacattcgcgccctgagttcaggttgtgtgcgtgtcaataaagcgtctgattta
gcgaacatgctgctgcaagatgctggctggaatgatgcacgggtctcttccaagataaaa
caaggtgataccacctacgtcaatatccgccagcgcgttccggtgcaattgtattatctg
acggcatgggttgcggaagacggtaaaccgcagtttagaacagatatttacaattatgat
aaaatggtgcgatctggtgcacaaatttcacagcaggctgagtttttattgcaataa
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