Yersinia similis: BF17_21060
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Entry
BF17_21060 CDS
T03057
Name
(GenBank) membrane protein
KO
K07347
outer membrane usher protein
Organism
ysi
Yersinia similis
Pathway
ysi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ysi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BF17_21060
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ysi02000
]
BF17_21060
02044 Secretion system [BR:
ysi02044
]
BF17_21060
02035 Bacterial motility proteins [BR:
ysi02035
]
BF17_21060
Transporters [BR:
ysi02000
]
Other transporters
Pores ion channels [TC:
1
]
BF17_21060
Secretion system [BR:
ysi02044
]
Chaperone-usher system
Type 1 pilus assembly protein
BF17_21060
Bacterial motility proteins [BR:
ysi02035
]
Pilus system
Fimbrial proteins
BF17_21060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_C
PapC_N
Motif
Other DBs
NCBI-ProteinID:
AHK21481
LinkDB
All DBs
Position
4395837..4398302
Genome browser
AA seq
821 aa
AA seq
DB search
MIIRFRLPSLSVLIYGSIVLASLIPSPILGGSLPPPSTTTTMPDTTLYLELVVNDRNFGS
AVPVSYRNNRYYLSQSQLRTIGLPISDPLALEIAVDNMAGVNVKYDGENQRLLINVPSEW
LPKQQIDVTEQDDFNLAQSSLGALFNYDIYATQGYLYSSLTHFSAWTEQRIFDRFGLLSN
TGVYRTHFPSNNNTDDAKGYIRFDTQWQKNDEEHLLRYSAGDLITGALPWSSAIRLGGIQ
IARHFAIRPDLITYPLPQFSGQAAVPSTVDLYIDNFRTQSANINPGPFVINNAPRINGAG
QATIVTTDALGRQISTSVPFYVASRLLKPGMWDFSLSGGILRRNYAIRSADYGEMAASGV
VRYGTTPWLTLEGRGEIAKEMNVIGGGVNLRMGLLGVLNSAYSISNTSNGTFNEVAEPRN
TNNATSSRLPNPVTSRNGRGNQRSLGYSYSNAFFNLNAQHIICSDEYADLANYKSPSRLS
RRMTQLTGSISLDSYGNLGSGYFDVRDTLGEQTRLINVSYSTSLLRNSNFYSALNRELGR
KGYNIQLVWSIPLGQRGSSSISATRTSDNQWTQRLNYSRAAPPNGGWGWNIAYANSASNR
NQYQQADIIWRTSMMESRVGLYGNSNNYNYWGGLTGSLVMMNRNLYASNMINDAFALVST
NGFSNIPVSYENQLIGTTNAKGYLLIPTVSSFYQAKFQIDPMNLPADVLLPNVERRLAIS
ERSGYLIDFPIERISAVNIRITDTSGQDLPKGSAIYTTGNVPISYVGWDGMVYIEHVTPL
NKLRKLNKIRIIRADNGTQCYSQFRLKTTEGIQDAGTTVCR
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgattatcagattccgactaccgtcattatcggtgctgatatatggctcaatagtgtta
gcgtcactaataccctctcctattttaggagggagcctccccccgccctcgacaacaaca
acgatgcctgataccacgttatatcttgaactcgtggtaaatgaccgtaactttgggagt
gctgtacctgttagctatcgcaacaaccgttattatctttctcaatcacagctaaggact
attgggcttcctatatcagacccactagcactcgagattgccgttgataatatggcgggc
gtgaacgttaaatatgatggagagaaccaacgcctattaatcaatgtccccagtgagtgg
ctaccaaagcaacaaatcgatgtgactgaacaagatgatttcaatcttgcgcaaagtagt
ttgggggctttattcaattacgatatttatgccacacaaggttacctgtactcatcttta
actcatttttcagcatggacagaacaacgcatttttgatcgttttggcttgctcagtaat
accggcgtttatcgcacccactttccaagtaataacaacacagatgacgctaaaggctat
attcgttttgatacccagtggcagaagaatgacgaagaacatctgctgcgttatagcgca
ggtgacctcattaccggtgctttgccatggagcagtgcgatacgccttggtggtattcag
atagcacgacattttgctatccggcccgatctcataacctacccattaccacaattttct
ggtcaagcagcagtacccagcaccgttgatctctacattgataacttcaggacacaatct
gccaatatcaacccaggcccttttgtcatcaataatgcaccgcgaataaatggtgctggc
caagctactatcgtcacaaccgatgcccttggcaggcaaatcagcacatcggtgcccttt
tacgttgccagtagactgttaaaacccggaatgtgggatttcagtctctcgggggggatc
ctacgtcgtaattatgcgattcgctcagcagactacggtgaaatggctgccagtggcgtc
gttcgttacggcaccacaccttggttgacactggagggccggggagaaatcgccaaagaa
atgaatgtcattggggggggcgtcaatctacgcatgggattattgggtgtcctaaatagc
gcatacagtataagcaacacatcgaacggcacttttaacgaggtggctgaaccgcgaaat
accaataacgccacatcgagtaggttaccgaaccctgtaacttcacgtaatggtcgtggc
aaccagcgttcattaggttatagctacagtaacgcattctttaatttaaatgctcaacat
attatctgtagtgatgaatatgctgatcttgctaattataaaagtccttcgcgcttaagc
cgacgtatgactcaactcacggggagtatcagcctagatagttacggtaacttaggatct
ggttactttgatgtcagagatactctcggcgaacaaacccggcttatcaatgtcagctac
agtacttcactgttacgcaatagcaacttttatagcgcactaaaccgtgagctgggccgt
aaaggttacaatatacaactggtctggagcattccgttaggtcagcgaggatcaagcagc
atcagtgcaacacgcacaagtgataaccaatggactcaacggctaaattatagtcgtgct
gcgcccccgaatggtggatggggctggaacatcgcttatgccaacagcgcaagtaaccgt
aatcaataccaacaggcagacatcatttggcgtacgtcaatgatggaaagtcgcgtgggc
ctatatggtaacagtaataactacaactattgggggggattaaccggttcattagtgatg
atgaatagaaatctctatgccagtaatatgattaacgatgcttttgccttggtatcaacc
aatggttttagcaatattccggttagctacgaaaatcaacttattggcacaactaatgca
aagggttatttgcttatcccgacagtctcctcattctatcaggcaaaattccagattgac
ccaatgaatttaccggcagatgtcttgctacccaatgttgaacgaaggttagctattagt
gaacgcagcggctatttaattgatttcccaattgagcgaatttccgcagtgaatattaga
attacagacacatcaggccaagacttaccgaaaggcagtgcaatatataccaccggtaac
gtcccgataagttatgtcggttgggacggcatggtatatatcgaacatgtgacaccatta
aataaattgagaaaattaaataaaattaggattatacgcgccgataatggcacacagtgc
tacagccagttcagactaaagacgacggaaggtatacaggatgctggcaccaccgtatgc
cgatag
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integrated database retrieval system
