Paradevosia tibetensis: FNA67_09880
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Entry
FNA67_09880 CDS
T06140
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
yti
Paradevosia tibetensis
Pathway
yti03410
Base excision repair
yti03430
Mismatch repair
yti03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FNA67_09880 (recJ)
03430 Mismatch repair
FNA67_09880 (recJ)
03440 Homologous recombination
FNA67_09880 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yti03400
]
FNA67_09880 (recJ)
DNA repair and recombination proteins [BR:
yti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
FNA67_09880 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FNA67_09880 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FNA67_09880 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
DUF7185
Motif
Other DBs
NCBI-ProteinID:
QEE20459
UniProt:
A0A5B9DP29
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All DBs
Position
2033412..2035208
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AA seq
598 aa
AA seq
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MLDERAYFLDVSRSVTGRAWVDRLDANASRLAQAIAQRTDLSEILARIVAARGVGPEEAE
SYLNPTIRDLMPDPSSLTAMDRLVARLAKAIGDRENVALFGDYDVDGACSCALMSRYLRH
FGLEPQVYIPDRIFEGYGPNVAAIDKLIDAGATLIITLDCGTVSDAPIAHARSRGVDVLV
IDHHLSDFELPEATAIVNPNRPDDVSGLGYLCAAGVTFMVLVAANRELRNLGRAGLPDLM
AMLDLVALATVCDVVPLKGLNRAFVVRGLEIARRGNNRGISALALAARVNGPLNPYHLGF
LIGPRINAGGRIGDAALGTRLLTIEDEHEALAIAARLDELNVERQRIEVEAVEEAARVAE
AEIGNGEGPPVLVLASENWHAGVVGLIAARLRERFERPAFAIALGPDGTGTGSGRSMPGV
DLGRAVIEAVEAGIIPKGGGHAMAAGVTVRTGQLGPFRAHMAQALTAQVAVARAATALQV
DAALTARGASPEFVHDLERAGPFGSGNPTPVFVFPAHKAKFAEVVGQGGHVRFTLASDDG
ARLKGIAFRAAGQPIGDVLLNGGNDTPLHIAGTLGIDHWQGREQVQIRVVDVASPASR
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatgaacgcgcctatttcctggacgtttcccgctcggttacgggacgcgcctgg
gtggaccggttggatgccaatgcctcgcggctggcccaggccatagcgcagcgcaccgac
ctttccgaaatcctggcgcggatcgtggcggccaggggagtggggccggaggaagcggaa
agctacctcaaccccaccatccgggacctgatgcccgatccctcctcgctcaccgccatg
gaccggctggtggcgcgcctggccaaggccatcggcgatcgcgagaacgtggccctcttc
ggcgactatgacgtggacggagcctgctcgtgcgccctcatgagccgctacctgcgccat
ttcgggctcgagccgcaggtctatattccggaccgcatctttgaaggatacgggcctaac
gtcgccgccatcgacaagctgatcgatgcgggcgccaccctcatcattaccctggactgc
ggcacggtgagcgacgcgccgatcgcccatgcgcgctcgcggggcgtagatgtgctggtc
atcgaccatcacctttcggacttcgagctgcccgaggcgaccgccatcgtcaatccgaac
cggcccgacgacgtctccggcctcggctatctctgcgcggcgggcgtgacattcatggtg
ctggtcgccgccaaccgcgagttgcgcaatctcggccgcgctggcttgccggacctgatg
gcaatgctggacctcgtggcattggcgaccgtttgcgatgtcgtgccgctcaaggggctc
aaccgcgccttcgtggtgcgtggcctcgagatcgcccggcgtggcaacaatcgcggtatc
tcggccctggcgcttgccgcccgggtcaacgggccgctcaatccctatcacctcggcttt
ctgatcggcccgcgcatcaatgccggcgggcgcatcggcgacgccgccctcggaacgcgg
ctgctcactatcgaggatgagcacgaggcgctggccatcgcggcacggctcgatgaactc
aacgtcgagcggcagcgaatcgaggtggaggccgtcgaggaggccgcccgcgtcgccgag
gcggaaatcggcaatggcgaggggccgcccgtgctggtgctcgcctcggagaactggcac
gccggcgttgtcggcctcattgcggcgcggctgcgcgaacgcttcgagcgcccggctttc
gccatcgcgctcggacccgacggcaccggcaccggctcggggcgttcgatgcccggcgtc
gacctggggcgtgctgtcatcgaggctgtcgaggctggaatcatccccaagggcggcggc
catgccatggcggcgggcgttaccgtgcgcaccggccagctcggccccttcagagcccac
atggcccaggcgctgaccgcccaggtcgcggtggcccgtgccgctacggcgctgcaggta
gatgcggccctcacggctcgcggcgcctcgccagagttcgtgcatgacctcgaacgcgcc
ggtcctttcggttcgggcaaccccaccccggttttcgtgtttcccgcccacaaggccaag
ttcgcagaggttgtggggcagggcgggcatgtgcgtttcacgctcgcctcggatgacgga
gcccgactcaaggggatcgccttccgcgccgccggccagcccattggcgacgttctgctc
aatggcggcaacgataccccgctccatatcgcgggcaccttgggaatcgatcactggcag
ggacgcgagcaggtgcagatccgggtggtcgacgtggcgtcgcccgcaagtcgttag
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