KEGG   Paradevosia tibetensis: FNA67_11035
Entry
FNA67_11035       CDS       T06140                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
yti  Paradevosia tibetensis
Pathway
yti03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:yti00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FNA67_11035
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:yti03019]
    FNA67_11035
Messenger RNA biogenesis [BR:yti03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     FNA67_11035
SSDB
Motif
Pfam: RNase_J_b_CASP Lactamase_B_2 RNase_J_C Lactamase_B RMMBL
Other DBs
NCBI-ProteinID: QEE20671
UniProt: A0A5B9DMQ1
LinkDB
Position
complement(2274547..2276229)
AA seq 560 aa
MKKPLTDELVFVPLGGVGEIGMNMGAYGFGPANRRKWIVVDCGVSFGGPDLPGIELIMAN
PEFLEENADDVLALILTHSHEDHYGAVLDLWPGFEKPVYATAFTAAMLAAKRAADAIVDE
VPVRLMQTGKPFEVGPFTIEPINVAHSIPESCALLITTPVGRVLHTGDWKLDPSPVGSPP
TDIERLKRIGADEGAPPLALICDSTNALKDGESPSESIVGDTLAALIAAAPYRVALTTFA
SNVGRVISIARAAEKAGRQVVVSGRALHRITGIARELGMMEGIAPFLDQDMYKSLPRDKV
VLLCTGSQGEARAAIARIARGEHPAIDLNAGDQVIFSSWAIPGNEREVIDIQNRLIDRGV
DVITQADGLVHTTGHPRREELKRLYDWVKPTVLVPVHGEAAHLQAHAKLGRDHGVPNVLE
IRNGDLVRLFPEPMSFPGEVRSGELYLDGLVLCTPEESGVKGRRRLSFGGHIVVSLAVTG
NGQVVSGPEVVIEGLPEVEDDDETIGEVVDKTIKGVLRSVPAKRRGDVEMLNSALHRAIR
AEVNSFWGRKPNVTVFVHRV
NT seq 1683 nt   +upstreamnt  +downstreamnt
atgaagaagccattgaccgatgaacttgtcttcgtcccccttgggggcgtcggcgagatc
ggcatgaacatgggggcctacggtttcggccccgcaaaccgccggaagtggatcgtggtc
gattgcggcgtgagctttggcgggccggacctgccgggcatcgagttgatcatggccaac
ccggagttcctcgaagagaacgccgacgatgtgctggcgctgatcctcacccacagccac
gaagaccattacggcgccgtgctcgacctttggccgggcttcgagaagccggtctacgcc
accgcgttcaccgccgcgatgctggccgccaagcgcgccgccgatgccatcgtcgatgaa
gtgccggtgcgcctgatgcagaccggcaagccgttcgaagtcggcccgttcaccatcgag
ccgatcaacgtcgcgcactcgattcccgaaagctgcgcgctcctgatcaccacgccggtg
ggccgtgtgcttcacaccggcgactggaagctcgatccgtctcccgtcggcagcccgccg
accgacatcgagcgtttgaagcgcatcggcgccgatgaaggcgcgccgccgctggcgctc
atctgcgacagcaccaatgcgctcaaggacggcgagagcccgagcgaatccatcgtcggc
gatacgctggccgcgctcattgctgcagcgccctatcgcgtggcgctcacgaccttcgcc
tccaatgtgggacgcgtgatttcgatcgcccgcgcggccgagaaggccggacgtcaggtc
gtggtgtcgggcagggcgcttcaccgcatcaccggcatcgcccgtgagctgggcatgatg
gaaggcatcgcgccgttcctcgaccaggacatgtacaagagcctgccgcgcgacaaggtc
gtgctgctgtgcaccggctcgcagggcgaagcccgtgcggccatcgcccgcatcgcgcgc
ggcgagcacccggcgatcgacctcaatgccggcgaccaggtgatcttctcgtcctgggcg
atccccggcaacgagcgcgaagtcatcgacattcagaaccgcctcatcgaccgcggcgtc
gacgtcatcacgcaggccgatggcctggtgcacacgaccggccacccgcgccgcgaggag
ctcaagcgcctttacgactgggtcaagccgacggttctggtccccgtgcatggcgaggct
gcgcaccttcaggcccatgccaagctcggccgcgaccatggcgttccgaacgtcctcgag
atccgcaacggcgatctcgtgcggctcttccccgagcccatgtctttccccggtgaagtt
cgctccggtgagctctatctcgacgggctcgtgctctgcacgcccgaggagagtggggtg
aaaggccgcaggagactttcgttcggcggtcatatagtcgtgagcctggcggtcaccggc
aatgggcaggtggtttcgggccccgaggtggtgatagaaggtctgcctgaggtcgaggac
gacgacgagacgatcggcgaggtggtcgacaagaccatcaagggcgtcttgcggagcgtt
ccggccaagcgccggggcgatgtcgagatgctcaacagcgccttgcatcgcgccatccgg
gccgaggtcaactcgttctggggccgcaagccgaacgtcacggtgttcgtgcaccgagtt
tag

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