Paradevosia tibetensis: FNA67_11035
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Entry
FNA67_11035 CDS
T06140
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
yti
Paradevosia tibetensis
Pathway
yti03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FNA67_11035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yti03019
]
FNA67_11035
Messenger RNA biogenesis [BR:
yti03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FNA67_11035
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B_2
RNase_J_C
Lactamase_B
RMMBL
Motif
Other DBs
NCBI-ProteinID:
QEE20671
UniProt:
A0A5B9DMQ1
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Position
complement(2274547..2276229)
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AA seq
560 aa
AA seq
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MKKPLTDELVFVPLGGVGEIGMNMGAYGFGPANRRKWIVVDCGVSFGGPDLPGIELIMAN
PEFLEENADDVLALILTHSHEDHYGAVLDLWPGFEKPVYATAFTAAMLAAKRAADAIVDE
VPVRLMQTGKPFEVGPFTIEPINVAHSIPESCALLITTPVGRVLHTGDWKLDPSPVGSPP
TDIERLKRIGADEGAPPLALICDSTNALKDGESPSESIVGDTLAALIAAAPYRVALTTFA
SNVGRVISIARAAEKAGRQVVVSGRALHRITGIARELGMMEGIAPFLDQDMYKSLPRDKV
VLLCTGSQGEARAAIARIARGEHPAIDLNAGDQVIFSSWAIPGNEREVIDIQNRLIDRGV
DVITQADGLVHTTGHPRREELKRLYDWVKPTVLVPVHGEAAHLQAHAKLGRDHGVPNVLE
IRNGDLVRLFPEPMSFPGEVRSGELYLDGLVLCTPEESGVKGRRRLSFGGHIVVSLAVTG
NGQVVSGPEVVIEGLPEVEDDDETIGEVVDKTIKGVLRSVPAKRRGDVEMLNSALHRAIR
AEVNSFWGRKPNVTVFVHRV
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagccattgaccgatgaacttgtcttcgtcccccttgggggcgtcggcgagatc
ggcatgaacatgggggcctacggtttcggccccgcaaaccgccggaagtggatcgtggtc
gattgcggcgtgagctttggcgggccggacctgccgggcatcgagttgatcatggccaac
ccggagttcctcgaagagaacgccgacgatgtgctggcgctgatcctcacccacagccac
gaagaccattacggcgccgtgctcgacctttggccgggcttcgagaagccggtctacgcc
accgcgttcaccgccgcgatgctggccgccaagcgcgccgccgatgccatcgtcgatgaa
gtgccggtgcgcctgatgcagaccggcaagccgttcgaagtcggcccgttcaccatcgag
ccgatcaacgtcgcgcactcgattcccgaaagctgcgcgctcctgatcaccacgccggtg
ggccgtgtgcttcacaccggcgactggaagctcgatccgtctcccgtcggcagcccgccg
accgacatcgagcgtttgaagcgcatcggcgccgatgaaggcgcgccgccgctggcgctc
atctgcgacagcaccaatgcgctcaaggacggcgagagcccgagcgaatccatcgtcggc
gatacgctggccgcgctcattgctgcagcgccctatcgcgtggcgctcacgaccttcgcc
tccaatgtgggacgcgtgatttcgatcgcccgcgcggccgagaaggccggacgtcaggtc
gtggtgtcgggcagggcgcttcaccgcatcaccggcatcgcccgtgagctgggcatgatg
gaaggcatcgcgccgttcctcgaccaggacatgtacaagagcctgccgcgcgacaaggtc
gtgctgctgtgcaccggctcgcagggcgaagcccgtgcggccatcgcccgcatcgcgcgc
ggcgagcacccggcgatcgacctcaatgccggcgaccaggtgatcttctcgtcctgggcg
atccccggcaacgagcgcgaagtcatcgacattcagaaccgcctcatcgaccgcggcgtc
gacgtcatcacgcaggccgatggcctggtgcacacgaccggccacccgcgccgcgaggag
ctcaagcgcctttacgactgggtcaagccgacggttctggtccccgtgcatggcgaggct
gcgcaccttcaggcccatgccaagctcggccgcgaccatggcgttccgaacgtcctcgag
atccgcaacggcgatctcgtgcggctcttccccgagcccatgtctttccccggtgaagtt
cgctccggtgagctctatctcgacgggctcgtgctctgcacgcccgaggagagtggggtg
aaaggccgcaggagactttcgttcggcggtcatatagtcgtgagcctggcggtcaccggc
aatgggcaggtggtttcgggccccgaggtggtgatagaaggtctgcctgaggtcgaggac
gacgacgagacgatcggcgaggtggtcgacaagaccatcaagggcgtcttgcggagcgtt
ccggccaagcgccggggcgatgtcgagatgctcaacagcgccttgcatcgcgccatccgg
gccgaggtcaactcgttctggggccgcaagccgaacgtcacggtgttcgtgcaccgagtt
tag
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