Paradevosia tibetensis: FNA67_11940
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Entry
FNA67_11940 CDS
T06140
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
yti
Paradevosia tibetensis
Pathway
yti03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FNA67_11940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yti03019
]
FNA67_11940
03009 Ribosome biogenesis [BR:
yti03009
]
FNA67_11940
Enzymes [BR:
yti01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
FNA67_11940
Messenger RNA biogenesis [BR:
yti03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FNA67_11940
Ribosome biogenesis [BR:
yti03009
]
Prokaryotic type
rRNA processing factors
FNA67_11940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
QEE20840
UniProt:
A0A5B9DNB5
LinkDB
All DBs
Position
2474834..2477530
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AA seq
898 aa
AA seq
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MPTKRMLVDAIHPEETRVVVTSGNRLEEFDFESAQRQQLRGNIYLAKVTRVEPSLQAAFV
EYGGNRHGFLAFSEIHPDYYQIPVADREALLRDEEHDDDHHDHEPSAAAAEAAAETSISL
PAGVSEPDAEADTQDMEGAHSHIEEAPVSNEPVESVGGGDTVEDEVPERRRSNNARKYKI
QEVIKRRQVMLVQVVKEERGNKGAALTTYLSLAGRYSVLMPNTARGGGISRKITNAADRK
RLKEITADLDVPQGMGVILRTAGASRTKAEVKRDYEYLLRLWENVRNLTLRSQAPSLVYE
EGSLIKRTIRDLYNKDIDEVWVAGDNAYREAKDFMRMIMPSHAKNVQQYRDDQPLFSKYN
VENQLDAMFSPQVTLPSGGYLVINPTEALVSIDVNSGRATKEHNIEDTALQTNLEAAEEI
ARQLRLRDLAGLIVIDFIDMIENRSNRAVERKLKDCLKNDRARIQVGRISHFGLMEMSRQ
RIRFGVVESSTHKCPLCEGTGLIRSVESVALMVMRHVEDTVLRRPGQSINVRVPMDVALY
ILNTKRDTLTALEEKYRLSITITADAKLTGTQFNIEKGETRVHHYSEQTATNTDHVRVDT
AAMDEVIEDEEVEETEGAEEEVSARSSENGGEGDSRRRRRRRRRGGERGEGERHAQPQQR
QAPESDAEGDEDEGDEEAAGEEANASQRDENGEPRKRRRRGRRGGRRNRRENGEQFENAE
NGEAPAAEAVAEAEPAEAAAEAPVVEAVAEAPAPEPVVAEAEAATPAEEVVAEKPKRTRT
RKKAAPAEEAPAAEAVAPAAEAVAEEPAAEAKPKRTRTRKKAAAAEEAVAAPAVTETAPA
AEPEGAAEAPAEPEKKSRKKALPPDEIIVSSTSAPEAPAAEEQPKKKAGWWQRGFLGS
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgccaaccaagagaatgctggtggatgccatccacccggaagaaacgcgcgttgtagtc
actagcggaaatcggctcgaagagttcgatttcgagtctgcccagaggcagcagctgcga
ggcaatatctacctcgccaaggttacccgagtggagccgtccctgcaggcggcgttcgtt
gaatacggcggcaaccgtcacggtttcctcgccttcagcgaaattcatcccgactactac
cagatccccgtggccgaccgcgaagccctgctgcgcgacgaagagcacgacgacgaccac
cacgaccacgagccctccgccgcagccgcagaggccgccgccgagacgtccatcagcctg
cctgccggtgtcagcgagcctgacgccgaggcggacacgcaggacatggaaggcgcgcac
agccacatcgaggaagctcccgtctccaacgagccggtcgagagcgtcggtggcggtgac
acggtcgaggacgaggtccccgagcgccgtcgcagcaacaacgcgcgcaagtacaagatc
caggaagtgatcaagcgccgccaggtgatgctggtgcaggtcgtcaaggaagagcgcggc
aacaagggcgcggccctgaccacctatctctcgctcgccggtcgctactcggtgctcatg
cccaataccgcccgtggcggcggcatctcgcgcaagatcaccaacgcggccgaccgcaag
cgcctcaaggaaatcaccgccgatctcgacgtgccccagggcatgggcgtgatcctgcgc
acggccggcgcctcgcgcaccaaggccgaggtcaagcgcgactacgaatacctgctgcgg
ctctgggagaacgtgcgcaacctgacgctgcgcagccaggcgccgagcctggtctacgag
gaaggctcgctcatcaagcggaccatccgcgacctctacaacaaggatatcgatgaagtc
tgggtggcgggcgacaacgcctaccgcgaagccaaggacttcatgcgcatgatcatgccc
tcgcacgccaagaacgtgcagcagtacagggacgaccagccgctgttctccaagtacaac
gtggagaaccagctcgacgcgatgttctccccgcaggtgaccctgccctcgggcggctac
ctggtgatcaacccgaccgaagccctggtttcgatcgacgtgaactccggtcgcgccacc
aaggaacacaatatcgaggacaccgcgctccagacgaacctggaggcggccgaggaaatc
gcccggcaactgcgcctgcgcgacctggcgggcctgatcgtgatcgacttcatcgacatg
atcgagaaccgctccaaccgggcggtggagcgcaagctcaaggattgcctcaagaacgac
cgagcgcgcatccaggtcggccgcatcagccatttcggcctgatggaaatgagccgccag
cgcatccgcttcggcgttgtcgaaagctcgacccacaagtgcccgctctgcgagggcacg
ggcctcatccgctcggtggaaagcgtggccctgatggtcatgcgccacgtggaagacacc
gtgctgcgccgccccggccagtcgatcaatgtccgcgtgccgatggacgtggcgctctat
atcctcaacaccaagcgcgacacgctgaccgcgctcgaggaaaagtatcgcctctcgatc
accatcacggccgacgccaagctgaccggcacccagttcaatatcgaaaagggtgaaacg
cgcgtccatcactacagcgagcagaccgcgaccaacaccgaccatgtgcgcgtggacacc
gccgccatggacgaggtcatcgaggacgaggaagtcgaagagaccgaaggcgccgaggaa
gaagtctccgcccgttccagcgagaacggtggcgaaggcgactcccgccgtcgtcgtcgc
cgccgccgccgtggtggcgagcgcggcgagggcgagcgccatgcccagccccagcagcgc
caggcgcccgaaagcgacgccgaaggcgatgaggacgaaggcgacgaggaagctgccggc
gaagaggccaatgcctcccagcgcgacgagaacggcgagccgcgcaagcgccgccgccgc
ggtcgccgcggtggccgtcgcaaccgtcgcgagaacggcgagcagttcgagaatgccgag
aacggcgaggctcctgcggcagaggccgtagccgaggccgagccggctgaagccgccgcc
gaggcaccggtcgtggaagcagtggccgaagcccctgcccccgagccggtggttgccgag
gccgaggccgccacgcccgccgaggaagtggttgccgaaaagcccaagcgcacccgcacc
cgcaagaaggccgctccggccgaggaagcccctgccgccgaggccgttgctcccgcagcg
gaagctgtcgccgaggagccggctgccgaggccaagcccaagcgcacccggacgcgcaag
aaggcggccgccgccgaggaagccgttgccgctcccgccgtgaccgaaactgcgcccgca
gccgagccggaaggggccgccgaagcgccggccgaaccggaaaagaagagccgcaagaag
gccttgccgcccgacgagatcatcgtgagctcgacgtcggcaccggaagcccccgccgcc
gaagagcagcccaagaagaaggccggctggtggcagcgcggtttcctgggcagctga
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