Paradevosia tibetensis: FNA67_12795
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Entry
FNA67_12795 CDS
T06140
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
yti
Paradevosia tibetensis
Brite
KEGG Orthology (KO) [BR:
yti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yti03016
]
FNA67_12795 (rnd)
Enzymes [BR:
yti01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
FNA67_12795 (rnd)
Transfer RNA biogenesis [BR:
yti03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FNA67_12795 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QEE20999
UniProt:
A0A5B9DQH3
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All DBs
Position
2657385..2658542
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AA seq
385 aa
AA seq
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MDLVTSTAVLAEFSARAAGYDFVTVDTEFLRETTYWPKLCLIQAATDDEAVLIDPLAPGL
DLAPFLELMNNPAVVKVFHAARQDIEIFVKLTGQVPQNIFDTQVAASVCGFGDSVSYDNL
VRSITNVDLDKSSRFTDWSARPLTDKQKLYALADVTHLRDIYKALRKQIEDTGRGAWVED
EMSVLRSIDTYVVQPDTAWERLKLKINRPRDLAALKVLAGWREKRAQDTDQPRSRILKDD
ALYELAQQRPLSPEDFEKLRAVPRGFGRSSAAGEIMNLLKSVEALTKAQLPPMPERYRGP
SPKGAVGDLLRVLLKAVSEQHGVATRIIATSDDIDAIVLDDEADVPALKGWRRKLFGDKA
LAVKHGRVGLAATRKGIIEIPIKES
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggatctagttacctccaccgctgtcttggccgagttcagcgccagggcggcggggtat
gattttgttacggttgataccgaatttcttcgcgaaacaacctattggccgaagctgtgc
ctcatacaggccgcaacggatgatgaagctgtacttatcgacccgctggcgcccggcctc
gacctcgccccgttcctcgaactgatgaacaatcccgccgtggttaaggtcttccacgcc
gcgcgccaggatatcgaaatcttcgtcaagctgaccggccaggtcccccagaacatcttc
gatacccaggtcgccgcaagcgtttgcggttttggcgacagcgtctcttacgacaacctg
gtgcgctcgatcaccaatgtcgatctcgacaagagttcgcgtttcaccgactggtcggcc
cgcccgctgaccgacaagcagaaactctacgcgctggcggacgtcacccacctgcgcgac
atctacaaggccctgcgcaagcagatcgaggataccgggcgcggtgcctgggtggaggac
gaaatgtcggtgctgcgcagcatcgatacctatgtcgtccagccggatacggcctgggag
cgactcaagctcaagatcaatcgcccgcgcgacctggccgccctcaaagtgctggccggc
tggcgcgagaagcgcgcgcaggacaccgaccagccgcgcagccgcattctcaaggacgac
gcgctttacgaactcgcccagcagcgcccgctctcgccggaagacttcgaaaagctgcgc
gccgtgccgcgcggcttcgggcgctcgagcgcggccggcgagatcatgaacctgctcaag
agcgtcgaagcgctgaccaaggcgcagctgccgccgatgcccgagcgctatcgcggcccc
tcgcccaagggcgccgtcggcgacctgctgcgcgtgctgctcaaggcggtctccgaacag
cacggcgtcgccacccgtatcatcgccacgtccgacgacatcgacgccatcgtgctcgat
gacgaggcggacgtccctgccctcaagggatggcggcgcaagctcttcggagacaaggcg
ctggcggtcaagcacggccgggtcgggctggccgcgacccgcaagggaatcatcgagatc
ccgatcaaggaatcctga
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