Paradevosia tibetensis: FNA67_12955
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Entry
FNA67_12955 CDS
T06140
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
yti
Paradevosia tibetensis
Brite
KEGG Orthology (KO) [BR:
yti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yti03032
]
FNA67_12955 (topA)
03400 DNA repair and recombination proteins [BR:
yti03400
]
FNA67_12955 (topA)
Enzymes [BR:
yti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FNA67_12955 (topA)
DNA replication proteins [BR:
yti03032
]
Prokaryotic type
DNA Topoisomerases
FNA67_12955 (topA)
DNA repair and recombination proteins [BR:
yti03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FNA67_12955 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
DUF6429
HC2
Peptidase_M35
Motif
Other DBs
NCBI-ProteinID:
QEE21029
UniProt:
A0A5B9DQK0
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All DBs
Position
2684352..2686964
Genome browser
AA seq
870 aa
AA seq
DB search
MKVVIVESPNKIKTINKYLGKDYEVMASFGHVRDLPAKDGSVRPDEDFAMSWEVDSKSNK
RLTDIARAVKESDELILATDPDREGEAISWHVLDVLKQKRAIRKDLPVRRVVFNSITQSA
ITEAMKHSRDIDEPLVDAYLARRALDYLVGFTLSPILWRKLPGSRSAGRVQSVALRLVCD
REDEIEKFKPEEYWSVLAKLIEKGKTFEARLYSVDGKKTDKLDIKSGDEAEAIRKAILAG
RFTVESVDKKPTKRNPYPPFTTSSLQQDASSRLGFSPSRTMQIAQRLYEEGIITYMRTDA
VQMAPEGIDQARRAIDKEFGTAYLPATPRIYQTKAKNAQEAHEAIRPTDMFRRPESLKGD
ADQQKLYGLIWRRTLASQMRPAEIERTTADIAVATDRAITLRAVGSVVTFPGFLALYGVE
AKEDREGDDDEDSRELPPLAVGDTPKLDACDIEQHFTQPPARYTEASLIKKMEELGIGRP
STYAATISTLIERNYVRLEKRALIAEDRGRIVTAFLESFFTRYVEYGFTAALEEQLDEIS
DGKLDYKQVLREFWEDFSRATAEIKDLRVSEVLDALNELLADHIFPAKEDGSDPRRCPTC
GTGTLSLKLGKYGAFIGCSNYPECKHTMQLSDAAAGGLSENAPSDGILGADPETGDNVYL
KSGRFGPYVQLGDEKEAKRSSLPKGWTPDSMTLDRALQLLSLPRLVGAHPETGLPITAAL
GRYGPFILHDGKYANLPDFEEVFTVGQNRAVDLLAAKAAGGFKRGGAAVAAIKTFEHDGG
PITVRSGRYGPYVNQGKINATIPKDAKPEDVTLEQALALLAARAEATGTKTKRAPAKKTA
TKAAATKKAPAKKATAAKKPAAKKAATKAE
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcgtcattgttgaaagtccgaacaagatcaagacgatcaacaaataccttggc
aaggattatgaagtcatggccagcttcggccatgttcgcgatcttccggccaaggacggc
tccgttcgtccggacgaagacttcgccatgtcatgggaagtcgacagcaaatccaacaag
cggctcaccgatattgcgcgcgccgtaaaggaatctgacgaactcatcctcgcgaccgac
ccggatcgcgaaggcgaggccatttcctggcacgtgcttgatgtgctcaagcagaagcgc
gccatccgcaaggacctgccggtccgccgggtggtgttcaattcgatcacgcagtcggcg
attaccgaggcgatgaagcactcgcgcgacatcgacgagccgctggtcgacgcctacctg
gcgcgccgcgctctcgactatctggtaggcttcaccctttcaccgatcctctggcgcaag
ctgccgggctcgcgctcggccggccgcgtgcagtcggtggccctgcgcctcgtctgcgac
cgtgaagacgagatcgaaaagttcaagcccgaggaatactggtcggtcctggccaagctc
atcgaaaagggcaagacgttcgaggcccgtctctattcggtggacggcaagaagaccgac
aagctcgatatcaagtcgggcgatgaggccgaggccatccgcaaggcgatcctcgccggc
cggttcacggtcgagagcgtcgacaagaagccgaccaagcgcaacccctacccgcccttc
accacctcgagcctgcagcaggacgcctcctcgcgcctcggcttctcgccctcgcgcacc
atgcagatcgcccagcggctctacgaggaaggcatcatcacctacatgcgtacggacgcc
gtgcagatggcgcccgaaggcatcgaccaggcgcgccgcgccatcgacaaggaattcggc
accgcctacctgcctgccacgccgcgcatctaccagaccaaggccaagaacgcccaggaa
gcgcacgaagccatccgtcccaccgacatgttccgccggccggaaagcctcaagggcgac
gccgaccagcagaagctctatggcctcatctggcgccgcaccctggccagccagatgcgc
ccggccgagatcgaacgcaccaccgccgacattgccgtcgcaaccgatcgcgccatcacg
ctgcgcgccgtcggctcggtcgtcaccttccccggcttcctggcgctctacggcgtcgag
gccaaggaggaccgcgagggcgacgatgacgaggatagccgcgaactgccgccgctggcc
gtcggtgacacgcccaagctcgatgcctgcgatatcgagcagcacttcacccagccgccg
gcgcgctacaccgaagccagcctcatcaagaagatggaagagctgggcatcgggcgcccc
tcgacctatgcggccaccatctcgaccctgatcgagcgcaactacgtgcggctggaaaag
cgcgccctcatcgccgaggatcgcggccgcatcgtcacggcattcctcgagagcttcttc
acccgttacgtcgaatacggtttcaccgccgccctcgaggagcagctggacgaaatctcg
gacggcaagctcgactacaagcaggtgctccgcgagttctgggaggacttctccagggcg
accgccgagatcaaggatctgcgcgtctccgaagtcctcgacgccctcaacgaattgctc
gccgatcacatcttcccggccaaggaagacggatccgatccgcgccgttgcccgacctgc
ggcaccgggacgctctcgctcaagctgggcaagtacggcgccttcatcggctgctcgaac
taccctgagtgcaagcacaccatgcagctctctgacgccgctgccggcggcctttcggag
aacgctccgagcgacggcatcctcggcgccgatcccgagacgggcgacaacgtctacctc
aagtccggccgtttcggtccttatgtgcagctcggggacgagaaggaagccaagcgctcg
tccctccccaagggctggacgcccgactcgatgacgctcgatcgcgcactccagctcctg
tcactgccgcgcctcgtgggcgcccatccggagaccggcctgccgatcacggctgccctg
ggccgctacggaccgttcattctccatgacggcaagtacgccaacctgcccgatttcgaa
gaagtcttcaccgtcgggcagaaccgagcggttgacctgctcgccgccaaggcggccgga
ggcttcaagcgtggcggcgctgccgttgccgccatcaagaccttcgagcacgacggcggc
cccatcaccgtgcgctccgggcgctatggaccctatgtgaatcagggcaagatcaacgct
accatccccaaggacgccaagcccgaggatgtgacgctcgaacaggccctcgcccttctg
gccgcccgcgcagaagccaccggcaccaagaccaagcgtgccccggccaagaaaacggcg
accaaggcggcagccaccaaaaaggccccagccaagaaggcgacggcggccaagaaacct
gctgccaagaaggcggcgacgaaagcggagtaa
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