Paradevosia tibetensis: FNA67_16285
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Entry
FNA67_16285 CDS
T06140
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
yti
Paradevosia tibetensis
Brite
KEGG Orthology (KO) [BR:
yti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yti03032
]
FNA67_16285
03400 DNA repair and recombination proteins [BR:
yti03400
]
FNA67_16285
Enzymes [BR:
yti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FNA67_16285
DNA replication proteins [BR:
yti03032
]
Prokaryotic type
DNA Topoisomerases
FNA67_16285
DNA repair and recombination proteins [BR:
yti03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FNA67_16285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QEE21649
UniProt:
A0A5B9DS86
LinkDB
All DBs
Position
complement(3322896..3323876)
Genome browser
AA seq
326 aa
AA seq
DB search
MSARLRKVTRDDLTIVRKRRGRGFCFLDATGKLVCDAPFKQRMADLAIPPAWRDVHVAPR
ANDHIQCVGIDEAGRAQYIYHPDWEVRRSARKQRRLAALSAALPRIRRRVRKDLGAPAGS
AELAQAIAVALIDRTAMRVGSEQYLRANGTRGAATLFSRDVVVDGDRVELAFVAKGGKRT
AYALKDRALADAIARIKALPGKRLLVYRDADGIVPLRTRTINTYLRQITGADISAKDFRT
LRASALAAEVLASMEPGASESARKRQIAGVARQVAEVLRNTPAISRKSYIAPALFQLFDS
GKLQMLWSASRGRAEERLGILLAEVA
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgaggcttcgcaaggtcacccgcgacgacctgaccatcgtcaggaaacggcgc
gggcgcggtttctgcttcctcgacgctaccggcaagctggtgtgcgatgccccatttaag
cagcgcatggccgacctggcgattccgcctgcctggcgggacgtgcatgtggcgccccgt
gccaacgaccacatccagtgcgtggggatcgatgaggccgggcgggcgcagtacatatat
catcccgattgggaggtgcgccggtcggcgcgcaaacagcggcggctggcggccctctcg
gcggcgctgccgcgtatccgtcgccgcgttcgcaaggacctcggcgcgccggccgggtcg
gcggaattggcccaggccattgccgtcgcccttatcgatagaacggcgatgcgggtgggc
agcgagcaatatttgcgtgccaacggcacgcgcggcgcggcaacgctgttttcgcgcgat
gtcgtggttgacggcgacagggtggagcttgccttcgtcgccaagggtggcaagcgcacg
gcctatgcgctcaaggaccgggcgctggccgacgccattgcgcggatcaaggctctgccg
gggaaacgccttctcgtctatcgggacgcggacggcatcgtgccgttgcgcaccaggacc
atcaacacgtatctgcgccagatcacgggtgccgacatttcggccaaggatttccgtacg
ctgcgtgccagcgcgctcgccgccgaggtcttggcgagcatggagcccggggcttcggaa
tcggcacgaaagcggcagatcgccggggtcgcccgccaggtggcggaagtgttgcgcaac
acgcccgccatcagccgcaaaagctacatcgccccggcgctgttccagctctttgacagc
ggcaaactgcagatgctctggtcggcctcccgcgggcgggccgaggaacgccttggtatc
ctcctggcggaggtggcctga
DBGET
integrated database retrieval system
