Paradevosia tibetensis: FNA67_16415
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Entry
FNA67_16415 CDS
T06140
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
yti
Paradevosia tibetensis
Pathway
yti03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FNA67_16415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yti03019
]
FNA67_16415
Enzymes [BR:
yti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FNA67_16415
Messenger RNA biogenesis [BR:
yti03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FNA67_16415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QEE21672
UniProt:
A0A5B9DRH9
LinkDB
All DBs
Position
complement(3351279..3352736)
Genome browser
AA seq
485 aa
AA seq
DB search
MTATFESLGLPGPLLASLAKAGFDTPTKIQAEAIPHQLKGKDILGIAQTGSGKTAAFGLP
ILAGLQALPGRPRPMTARALILVPTRELAVQIDEALRKMAGSMRLTTVLVLGGVSRYNQV
QKLAKGVDICIATPGRMKDLVDDDKVWLSETRWLILDEADRMLDMGFIGPVKEIASKISW
KRQTALFSATMAPEISKLAEGLLREPVRVEATVPGTTVAEIEQRVIMAGSKAKREELNKL
LGDAALERVIVFTRTKHGADRVTKNLSIDGFEAAAIHGNKSQNARQAALKGFSSGRVRIL
VATDIAARGIDVPGITHVINYDLPDDAENYVHRIGRTGRNGASGVAITLCDGTEKGQLRD
IEKLIRKSLPVSGDLSIVEVDPPKKAKGNNGRKPNPNAGAPRARKPAGKTLAGFNDGTRH
QEPAPHRAHGDKKRKDGEAARTRNGQPGGKPAAAKQGKPRWNKNQKDAGRARRAEGGRGR
GERVA
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
ttgacagcaacttttgaatccctcggacttccgggcccgctgcttgcttcgctcgcaaaa
gccgggttcgatacccccaccaagatccaggccgaggctatcccccaccagctcaagggc
aaggacatcctgggcatcgcccagaccggctcgggcaagacggcggcgtttggcctgccg
atcctggccggcctgcaggcgctgcccggccgcccgcgtccgatgacggcgcgcgcgctc
atcctcgttccgacgcgcgaactcgccgtccagatcgacgaagcgctgcgcaagatggcc
ggcagcatgcggctcaccaccgtgctcgtgctgggtggcgtgtcgcgctacaatcaggtc
cagaagctggccaagggcgtcgatatctgcatcgccacgcccggccgcatgaaggacctc
gtcgatgacgacaaggtgtggttgagcgaaacccgctggctgatcctggacgaagctgac
cgcatgctcgacatgggcttcatcggcccggtcaaggaaatcgcttccaagatcagctgg
aagcgccagacggccctgttctcggccaccatggcgcccgaaatctccaagcttgccgaa
gggttgctgcgcgagccggttcgtgtcgaggccaccgtgccgggcaccaccgtcgccgag
atcgagcagcgcgtcatcatggcgggttccaaggcgaagcgcgaagagctcaacaagctt
ctcggggacgccgcgctcgagcgcgtcatcgtcttcacccgtaccaagcacggtgccgac
cgcgtcaccaagaacctgtcgatcgatggtttcgaggccgcggccattcacggtaacaag
agccagaacgcccgccaggcagctctaaagggcttttcgtccggccgcgtgcgcatcctt
gtcgccaccgatatcgcggcgcgtggcatcgacgttccgggcatcacgcacgtcatcaat
tacgacctgcccgatgatgccgagaactatgtgcaccgcattggccggaccgggcgcaat
ggcgcttcgggcgtggccatcacgctttgcgatggcaccgaaaagggccagttgcgcgac
atcgagaagctgatccgcaagagcctgccggtttccggcgatctttcgatcgtggaagtc
gatccgcccaagaaggccaagggcaataacgggcgcaagcccaaccccaatgccggggcc
ccccgtgcgcgcaagccggccggcaagaccctggccggcttcaacgatggcacgcgccat
caggaaccggcgccgcatcgcgcccacggcgacaagaagcgcaaggacggcgaggccgcc
cgtacccgcaacggccagcccggtggcaagccggcggcagccaagcagggcaagccgcgc
tggaacaagaaccagaaggatgccggtcgcgcgcgtcgggccgagggtggtcgtggccgt
ggcgagcgcgtcgcctga
DBGET
integrated database retrieval system
