Paradevosia tibetensis: FNA67_18310
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Entry
FNA67_18310 CDS
T06140
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
yti
Paradevosia tibetensis
Brite
KEGG Orthology (KO) [BR:
yti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yti03019
]
FNA67_18310 (hrpB)
Enzymes [BR:
yti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FNA67_18310 (hrpB)
Messenger RNA biogenesis [BR:
yti03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FNA67_18310 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
HA2_N
CON_HrpB
AAA_30
Flavi_DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
QEE22009
UniProt:
A0A5B9DT95
LinkDB
All DBs
Position
3739134..3741587
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AA seq
817 aa
AA seq
DB search
MPLLSPLPIDAALPLLLAALEAGPFAVLVAPPGAGKTTRVPLALLDAPWRGDGRIVMLEP
RRLAARAAARRMAQTLGEEVGETVGYRVRLDNKITRKTRIEVVTEGVFTRMLLDDPELTG
IAAVLFDEFHERSLDGDLGLALALDAAALREDLRLLVMSATIDGARVARLLGDAPVIESE
GRAFPVETRYVVPDPLARLEDQVTAATLEAMNSEPGSALVFLPGQAEITRTAERLAGKVP
ANTDIAPLYGQLTPAEQDRAVQPAPRGRRKIVLATSIAETSLTIEGVRIVIDSGFRRVPT
YEPATGLSSLETRRVSRAAADQRRGRAGRTEPGICFRLWNEGQNSALDAFDTPEILAADL
SGLALDLASWGVTDPKAMAFLDSPPAPAWSEAVTLLKGLEALDAQGRITPEGRALARLPL
HPRLAHMVHCAAGENDALTAAEIAVLLGERGLGGAGIDLAHRLDRFRRESGRRAEEARNL
ARRWAALVGNKSGSGEDAGRHLARAYPDRVAQASGARGRFRLANGRAASLEETDALAAAP
YLVVADLTGSAANGRIRAAAAIDRATIEELFAGQITSETVLAFDKGARSLRARRIRRLGA
LRLTEEPLAVPTSEEAARLLAAGLAETGIAALPWSKDQNALRARSTYLHQTLGDAWPDLS
DPAIAQDGAATLAPYLSGHAGLADLSADDLAGFIEEVLPWARRAEMDKLLPSHFAAPSGS
NLPIDYAGENGPTLEIRVQELFGLDRHPAVAGGKVPLLLVLLSPAHRPIQTTRDLPGFWR
GSWKDVAKDLKGRYPKHYWPDDPLAAQATARAKPRGT
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcctttcgccgctccccatcgatgccgccctgcccctgcttctcgccgcgctc
gaggccgggccgttcgccgtgctcgtcgcgccgccgggcgccggcaaaaccactcgcgtg
ccgctggcattgctcgatgccccgtggcgtggcgatggccgcatcgtcatgctcgaaccc
cgccgcctcgccgcccgcgccgccgcccgccgcatggcgcagacgctgggcgaggaagtc
ggcgaaaccgtcggctaccgcgtccgcctcgacaacaagattaccaggaagacgcgcatc
gaagtcgtcaccgaaggcgtcttcacccgcatgctgctcgacgatcccgaactcaccggc
atcgccgccgtactcttcgacgaattccacgagcgcagcctcgatggcgatctggggctc
gccttggcgctcgacgctgccgccctgcgtgaagacctgcggctcctggtgatgtcggcg
acgatcgacggcgcccgggtggcgcgcctcctcggcgatgcgccggtcatcgaaagcgaa
ggccgcgccttcccggtcgagacccgctatgtcgtcccagatccactggcccgcctcgaa
gatcaggtgacggcagccacgctcgaggccatgaacagcgagcccggctccgccctcgtc
tttctgcccgggcaggccgagatcacccgcaccgcggagcgccttgccggcaaggtgccc
gccaataccgacatcgccccgctctatggccagctcaccccagccgaacaggatcgcgcc
gtccagcccgccccacgcggccgccgcaagatcgtgctggcaacctcgatcgcggaaacc
tcgctcaccatcgagggcgtgcgcatcgtcatcgattccggctttcgccgcgtcccgacc
tatgagcccgccaccggcctctcctcgctcgaaacccgccgcgtttcccgcgccgccgcc
gaccagcgacgtggccgcgccggccgtaccgaaccgggcatttgctttcgcctctggaac
gaggggcagaattcggcgctcgacgccttcgacacgcccgaaatcctcgccgccgacctt
tccgggctcgccctcgacctcgcctcctggggcgtcaccgatcccaaggcgatggccttt
ctcgattccccgcccgctccggcctggagcgaagcggtgaccttgctcaaagggctcgag
gccctcgacgcgcagggtcgcatcacgcccgaaggtcgagccctcgcgcgcctgccgctc
catccgcgcctcgcccacatggtccattgcgccgccggcgagaacgacgccctcactgcc
gccgagatcgccgtcctcctcggcgaacgcggccttggcggcgccggcatcgacctagcc
caccgcctcgaccgcttccgccgcgaatccggccgccgcgccgaggaggcgcgcaatctc
gcgcgccgctgggccgccctcgtcggcaacaaatccggcagcggcgaagacgccggccgc
catctcgcccgcgcctatcccgatcgcgtggcgcaggcctcgggcgcgcgcggtcgcttc
cggctcgccaatggccgggccgcaagccttgaagagaccgacgccctggccgccgcgcct
tatcttgtagtggccgatctcacggggagcgccgcgaacggccgtatccgcgcggcggcc
gccatcgaccgggcaacgatcgaggaattgttcgccggccagatcaccagcgaaaccgtg
ctcgccttcgacaagggcgccaggagcctgcgcgcccgccgcatccgtcgcctgggcgcc
ttgcgtctcaccgaggaacccctggccgtgccgacaagcgaagaggccgcgcgcctcctg
gccgccggactggccgaaaccggcatcgccgccctgccctggagcaaggaccagaacgcg
ctgcgcgcccgcagcacctatctgcatcagaccctgggcgatgcctggcccgacctttcg
gaccccgccattgcccaggatggtgccgccaccctcgcgccctacctctctggccacgct
ggactagccgacctttcggccgacgacctagccgggttcatcgaggaagtgctcccctgg
gccaggcgcgccgagatggacaagctgctccccagccatttcgccgccccctccggctcg
aacctgccgatcgactatgccggtgagaacggcccgacccttgagatccgcgtccaggag
ctcttcgggcttgaccgccatcctgccgtcgccgggggcaaggtgccgctcttgctggtg
ctgctttcgccggctcaccgccccatccaaaccacccgagacctccccggcttctggcgc
ggatcgtggaaggatgtcgccaaggacctcaaggggcgctatcccaagcactactggccg
gacgaccccctggccgcccaggcgacggcgcgcgccaagccgcgcggcacctga
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