Zonotrichia albicollis (white-throated sparrow): 102060535
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Entry
102060535 CDS
T07911
Symbol
SOX13
Name
(RefSeq) transcription factor SOX-13
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zab03000
]
102060535 (SOX13)
Transcription factors [BR:
zab03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102060535 (SOX13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
CREPT
AAA_23
Motif
Other DBs
NCBI-GeneID:
102060535
NCBI-ProteinID:
XP_014130041
LinkDB
All DBs
Position
Unknown
AA seq
611 aa
AA seq
DB search
MSMRSPISPPPELDGAGTMVNCAVKTEEKKEGSPETPPGAAPSADPRPQDPPGPPPKDGT
DPQALPQESCSPSGDVPEPRRSAFEPAGSGQEKLDFNRNLKEVMPTIEKLLASDWKERLL
GRNAAESKEVKGTQESLAEKELQLLVMINQLSTLRDQLLTAHSEQKNMATMLFEKQQQQM
ELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFTPGHQPLPVTPESQLA
LPIQPIPCKPVDYPVQLLHSPPPATLKRPAGPGHLQMQETSQPLNLTAKPKGSELPSASS
SPSLKMSGCQALPPSHGASRELQSSPSNLPLGFLGEGDAITKAIHDARQLLHGHGAAMEG
SLSSPYRKEPVGIDSSPVKERMEETPGHRLDEALLSCEMDGSRHFPESRNNNHIKRPMNA
FMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMSNQEKQPYYEEQARLSRQHLEKYPD
YKYKPRPKRTCIVEGKRLRVGEYKALMRNRRQDARQGYLIGPQGSQVPPSSSDVLYPRPV
GVQLPPPLLEHYLPRGVDPTMPVIVNTRSLKDGDAGDDGHSVPEGDMYRYSEDEDSEGED
KSDGELVVLTD
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgaggagccccatctctccacccccggagctggatggagcgggcaccatggtg
aactgtgccgtcaagaccgaggagaagaaggagggcagccctgaaacccccccgggggct
gcccccagcgctgacccccggccccaggacccaccagggccccctcccaaggatggcacc
gacccccaggccctgccacaggaatcctgctctccctccggggatgtccccgagccccgg
cgctccgcctttgagccggccgggagcggccaggagaagctggacttcaacaggaacctg
aaggaagtgatgccaaccatcgagaagctgctggccagtgactggaaggagcggctgctg
ggccggaacgcggctgaatccaaggaagtgaaaggaacgcaggagagcctggcggagaag
gagctgcagctgctggtgatgatcaaccagctgtccacgctgcgggaccagctgctgacg
gcgcactcggagcagaagaacatggccaccatgctcttcgagaagcagcagcagcagatg
gagctggcacggcagcagcaggagcagatcgccaagcagcagcagcagctcatccagcag
cagcacaagatcaacctcctccagcagcagatccagcaggtcaacatgccctacgtgatg
atccccgccttcacccccggccaccagcccctgccggtgacccccgagtcccagctggca
ctgcccatccagcccatcccctgcaaaccggtggattacccggtgcagctcctgcacagc
ccccctcctgccacgctcaagagacccgcgggcccgggacacctccagatgcaggagacc
tcgcagccgctgaacctgacggccaagcccaagggctcggagctgcccagcgcctccagc
tctcccagtttgaagatgagcggctgccaggcgctgccgccgagccacggggccagcagg
gagctgcagagcagcccctccaacctcccgctgggattcctgggagagggcgatgccatc
accaaagccatccacgacgcgcggcagctgctgcacggccacggcgccgccatggagggg
tcactgagcagcccctaccgcaaggagcccgtcgggatcgactcctccccggtgaaggag
cggatggaggagacccccggccaccggctggacgaggctctgctgagctgtgagatggac
ggctcccggcacttcccggagtccaggaacaacaaccacatcaagcggcccatgaacgcc
ttcatggtgtgggccaaggacgagcgcaggaagatcctgcaggccttcccagacatgcac
aactccagcatcagcaagatcctgggatcccgctggaaatccatgtccaaccaggagaag
cagccctactacgaggagcaggcacggctgagccggcagcacctggagaagtacccggac
tacaaatacaaaccgcggcccaagcgcacctgcatcgtggagggcaagcggctgcgcgtg
ggcgagtacaaggcgctgatgaggaaccggcgccaggacgccaggcagggctacttgata
gggccgcagggcagccaggtgccccccagctcctcggacgtgctgtacccgcggccggtg
ggcgtccagctgcccccgcccctgctggagcattacctgccccgcggcgtggaccccacc
atgcccgtcatcgtcaacacccgcagcctcaaggacggcgacgccggggacgatgggcac
tcggtgcccgagggggacatgtaccgctacagcgaggacgaggactcggagggcgaggac
aagagcgacggcgagctggtggtgctgacggactga
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