Zonotrichia albicollis (white-throated sparrow): 102060695
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Entry
102060695 CDS
T07911
Symbol
SMC5
Name
(RefSeq) structural maintenance of chromosomes protein 5 isoform X1
KO
K22803
structural maintenance of chromosomes protein 5
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zab03400
]
102060695 (SMC5)
DNA repair and recombination proteins [BR:
zab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
102060695 (SMC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_25
AAA_29
Motif
Other DBs
NCBI-GeneID:
102060695
NCBI-ProteinID:
XP_005489702
Ensembl:
ENSZALG00000011013
UniProt:
A0A8D2MUV8
LinkDB
All DBs
Position
Unknown
AA seq
1054 aa
AA seq
DB search
MAAAREEGKAVKRRESPYVLGSIVRVLMKNFLTYTVCEVYPGPSLNVVVGSNGTGKSSIV
CAICLGLAGKPAFLGRADKVSLFVKQGYMKGVVEIELFQSPENIIITREIYVVNNASVWY
INREPATLKTVEEQIAALNIQVDNLCQFLPQDKVGEFTRLSKAELLEATEKSIGSPEMYQ
LHCELKNFREKERELENLFREKTTSLEKMKQRVERYKQDVERYHECKRHVDLIEMLERKR
PWLEYENLREQHEEVKQCRNQVQKELKCLREKQAPWTRNIQKAEENLNNLDMKTRDNTAE
IRNISQKCKEKQDALEMKDKQIEEINQAFRMKKDEERSRQKKIDQTQQIIQEWQNELDTM
AVCENLQPQIDAVNTELKKLQEEKANIDNDVSDLRAEKTNQEREEKRIIDRLGQLNNIMH
VKEEKLKQRFQDTHSALMWLRNNKDKFKKKPCEPMMLEINMKDSKFAQYVENHISSNDLR
AFVFECQEDMETFLVEVRDRQNLRVNAVCAPDKSCAEILPSRPIEELHRYGFYSYLRELF
DAPSPVMSYLCYQYHVHDVPVGTQKTRDMIERVTQETNLRQIYTAEERYVIKISAYTKQT
VTSNMCLKDAQYLTSSVDTEERGQLENQRQDISNTLKSLDARLTALFERQKLLDLKDNKL
RQEKKALLERENQRRLLESKIGVKKDSLRQLEQDAIDLEMEFQLADVKIKEINKQKAELV
IELMHLMKRIIPLNVIKVDLACQMTRVTAKKNRLQSEHKAGTVQLRAAQQRFHELDSKRQ
YLYDKCRELLERAQHICRLRPDQDFPEEFKVAFQTLPDTLEEIDAFLNEEKTRASCFTGL
SSSVVEEYNKQTQEIQQLTEYLEEKRNELNNYKQNISQVKEKWINLLKVMIEQINEKFSK
FFSSMQCVGEIDLHKENEEEYEKYGIRIRVKFHNSTELHELTPYYHSGGEKTVSTMLYLM
ALQELNRCPFRIVDEINQGMDPTNERRVFEMVVETACKKRTSQYFLITPKLLQNLTYNNK
MTVLLVYNGPFMLETCKWNLKRFKKRQRRLSCMT
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgcgggaagagggaaaagctgtgaagcgtcgtgagtccccctacgtactg
ggctccatcgtcagggtcttaatgaagaacttcctgacatacactgtctgtgaagtatat
ccagggcccagcctgaatgtggttgttggttctaatggcacaggcaagtcaagtattgtt
tgtgccatctgcttgggactggctggaaaacctgctttcttagggcgagctgataaggtt
agtctgtttgtgaagcaggggtacatgaaaggcgtagtggaaattgaactgtttcagtca
ccagaaaatattattatcacacgtgagatttatgtggtgaacaacgcatcagtgtggtat
atcaacagagaaccagcaaccctgaaaacagtggaagaacaaattgcagccttaaacatc
caggtggacaatttgtgccagtttcttcctcaggacaaagttggagaatttacaagattg
agtaaggctgagttgctcgaagccactgaaaagtccattggttctccggaaatgtaccag
ttgcattgcgaactgaaaaatttcagagaaaaggaaagagaactagagaacttgttcaga
gaaaaaaccacctcattggagaaaatgaagcagagggttgaacggtacaagcaagatgtt
gaaagataccatgaatgcaagcgccatgtagacttaatagagatgcttgagaggaaaagg
ccatggctggaatatgaaaaccttcgtgaacagcatgaagaagtgaaacagtgccgaaac
caagttcagaaagaactgaagtgtctgagagaaaagcaggccccatggacaagaaacatt
caaaaagctgaagaaaatttaaacaatctggatatgaaaaccagagataatactgctgaa
atcagaaatatttcccagaagtgtaaagagaaacaagatgctttggagatgaaagataaa
cagattgaagaaattaatcaagcattcagaatgaaaaaagatgaagaaagaagcaggcag
aagaaaatagaccaaactcaacaaataatacaagagtggcagaatgagctggatacaatg
gcagtctgtgagaatcttcagccacaaattgatgctgttaatactgagctgaaaaaatta
caagaagagaaagcaaatattgataacgatgttagtgatctaagagcagaaaaaaccaac
caagagcgagaagagaaaagaataattgatcgccttggacaacttaataatataatgcat
gtgaaggaagagaagcttaaacagaggttccaagacacgcactctgctcttatgtggcta
agaaacaacaaagacaagtttaaaaaaaagccttgtgaacccatgatgcttgaaatcaat
atgaaagacagtaaatttgcacaatatgttgaaaatcacatttcgtccaatgacttgagg
gctttcgtttttgagtgtcaagaagatatggagacatttctggtggaggtgcgtgatcgt
cagaatctaagagtgaatgctgtatgtgcgcctgataaatcatgtgctgaaattttacca
tccagacctattgaagaattacaccgatacggattttattcatatttacgagagttattt
gatgcgccttctcccgtgatgagttacctttgttaccagtaccatgttcatgatgttcct
gtgggaacacagaagaccagagacatgattgaaagggtcacacaggaaaccaatctgagg
caaatttatacagcagaagaaagatatgttattaaaatatctgcttacacaaaacaaacc
gtcactagtaacatgtgcttgaaggatgcacagtatctcactagttcagtggatacagag
gaaagaggacagttggaaaaccagcgacaggatatcagtaatacgttaaagtcattggat
gcacgtttgactgcactgtttgagagacagaaacttctggatctcaaggacaataaactc
aggcaggagaagaaggcacttttagagagagaaaaccagaggaggctgttggaatcaaaa
attggtgtgaagaaggatagtttaagacagctggaacaagatgctattgacctagagatg
gaatttcagctggcagatgtaaaaatcaaagaaataaataaacagaaagcagaacttgtt
attgaactgatgcatctcatgaagaggatcataccattgaacgtcatcaaagtagatcta
gcttgtcagatgaccagagtgactgctaagaagaacagactacaatcagagcacaaggca
ggaactgtacagctaagagctgcacagcaacgttttcatgaactggatagtaagaggcaa
tatctttatgacaagtgcagggaactgttggaacgggctcaacacatctgcagattgcgt
ccagatcaagattttccagaagaatttaaagttgcttttcagactcttccagacacattg
gaggaaattgatgcttttctgaatgaagagaaaaccagggcttcctgtttcacaggcctc
agtagttcggttgttgaagaatacaataagcaaacacaagaaatacagcagttaacagag
tatctagaggaaaagagaaatgagttgaataactataagcaaaacatttcacaggtcaaa
gaaaaatggataaacctcttgaaagtgatgattgaacaaattaatgaaaagttcagtaag
ttctttagttctatgcagtgtgttggtgaaattgatcttcataaggaaaatgaggaggag
tatgagaagtatggaattcgcattagagtcaaattccacaatagcactgaacttcatgaa
ttgactccgtattatcatagtggaggtgagaaaactgtttccactatgttatacctgatg
gcgctgcaagaactcaacagatgtcccttcaggattgttgatgaaataaatcagggaatg
gatccaacaaatgagagaagagtttttgaaatggttgtggaaactgcttgtaaaaaaagg
acatctcagtacttcctcattacaccaaagctcctgcagaatctcacttacaataacaag
atgactgtgctgcttgtctacaatgggccttttatgctggagacatgcaaatggaaccta
aagcgcttcaagaaacggcaacggcgcctttcatgcatgacttaa
DBGET
integrated database retrieval system
