Zonotrichia albicollis (white-throated sparrow): 102060743
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Entry
102060743 CDS
T07911
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03020
RNA polymerase
zab03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
102060743 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
102060743 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zab03021
]
102060743 (POLR2B)
03400 DNA repair and recombination proteins [BR:
zab03400
]
102060743 (POLR2B)
Enzymes [BR:
zab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
102060743 (POLR2B)
Transcription machinery [BR:
zab03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
102060743 (POLR2B)
DNA repair and recombination proteins [BR:
zab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
102060743 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
102060743
NCBI-ProteinID:
XP_005485417
Ensembl:
ENSZALG00000016736
UniProt:
A0A8D2QJF5
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGYDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRFTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgcggacgaagatatgcagtatgatgaagacgacgatgaaatcacgcccgac
ctgtggcaggaggcctgctggattgttatcagctcctattttgatgaaaagggtttagtc
aggcaacagttggattcctttgatgagtttattcagatgtctgtgcagagaattgttgaa
gatgctccaccaattgatttgcaagctgaagcccagcatgcctcaggagaagtggaagag
ccaccccggtatttgttgaagtttgaacaaatctatctctccaagcctacacattgggaa
agagatggagcaccctcacctatgatgccaaatgaagccaggctgagaaacctcacgtat
tctgctcccttgtatgtggatataactaaaacagttattaaagaaggggaggaccaattg
cagacccagcatcagaaaacctttataggaaagattcctatcatgctgcgttccacgtac
tgtttgctgaatggcttaactgaccgtgatctctgtgagctgaacgagtgcccactggat
cctgggggctacttcatcatcaatggctcagaaaaggttctgattgctcaggagaagatg
gctacaaatacagtgtatgtgtttgcaaagaaagattcaaaatatgcctacacaggagag
tgtaggtcttgtctggaaaattcctctcgaccaacaagtaccatatgggtcagcatgctg
gccagaggtggacagggtgcaaagaagagtgccattggtcagcgcattgtagcaactctg
ccatacatcaaacaagaggtgcccatcatcattgtcttccgtgcactcggctttgtgtcc
gacagggacattctagagcacatcatctatgactttgaagacccagaaatgatggaaatg
gtcaaaccatctctggatgaagcatttgtcattcaggagcaaaatgttgccctaaacttc
attggctcaagaggtgccaagccaggtgtcaccaaagaaaagagaatcaagtatgccaaa
gaagtcttgcagaaagaaatgctcccacatgttggtgtcagtgacttctgtgaaaccaaa
aaggcctattttctagggtatatggttcatagactgttgctggcagcactgggaagaaga
gagctggatgacagagatcattatggcaacaaaagactggatcttgctgggccactcttg
gctttcctcttcagaggaatgttcaagaatttgctgaaggaagtgagaatatatgcacaa
aagttcattgacagagggaaggatttcaacttggagttggcaattaaaacaagaattatt
tcggacggtttgaaatactcattggcaactggaaactggggtgaccagaagaaagctcat
caggccagagcaggagtatctcaggtgttgaaccgcctaactttcgcatccaccctttcc
cacctgagacgcctgaattctccgattgggagagatggaaagctggccaagccccggcag
ctgcacaacaccctgtggggaatggtttgccctgctgagacccctgagggccatgcagta
ggacttgtgaagaacttagccctgatggcttacatttctgtggggtctcagccatcccca
attctggagttcttggaagagtggagtatggaaaacttagaagaaatatctccagcagca
atagctgatgctaccaagatatttgttaatggctgctgggtaggaatacacaaagatcca
gagcagctgatgaataccctaaggaagcttcgtcgtcagatggacatcattgtgtcagag
gtgtcgatgatcagagatattcgtgagcgagaaatccgcatctacactgatgcaggcaga
atttgtcggccccttttgattgtggagaaacagaagttgctgctgaagaaaaggcacatt
gaccaactgaaggaaagagagtataacaattacagttggcaggatcttgtggccagtggt
gtagtagagtacattgacaccctggaagaagagactgtgatgctggcaatgactccagat
gacttgcaagagaaaggtgtggcatattgttcaacatacacacactgtgagattcaccca
tccatgatcctgggagtgtgtgcatctatcatccctttccctgatcacaaccagtctccc
aggaacacataccagtctgctatgggtaagcaggctatgggagtctacatcaccaacttc
catgtccgtatggatacgctggcacatgtgctctattatccccagaagcccctggtaaca
acacgctccatggagtacttgaggttcagagagctgccagcaggtatcaactcgattgta
gccattgcatcatacacaggctataaccaggaagactctgtcattatgaaccgttctgct
gttgacagaggctttttcaggtccgtgttctatcgctcctacaaagagcaggagtctaag
aaagggtatgaccaagaggaagtttttgagaagcctacacgtgaaacttgccaaggtatg
agacacgcaatctatgacaaacttgatgatgatggtttgatagccccgggggtacgtgtg
tctggggatgatgtcatcattggcaaaacagtcacactgccagagaacgaagatgagctg
gaaagcaccaacaggcgcttcaccaagcgagactgcagcaccttcctgcgcaccagcgag
accggcattgtagatcaggtcatggtgaccctgaaccaggaagggtacaagttctgcaag
atcagggtacgttctgtaagaattccacaaattggagataaattcgctagcagacacggt
cagaaaggaacctgtgggatccagtacaggcaagaggatatgcccttcacgtgtgaaggc
atcacacctgatatcattatcaacccccacgccatcccttcccgaatgaccattggtcac
ttgattgagtgtcttcagggcaaggtgtctgcaaacaagggagaaattggtgatgctaca
ccttttaacgatgcggtcaacgtgcaaaagatttccaaccttttatcagattatggctat
catctaagaggaaatgaggtcctctacaatggcttcactggtcgaaaaatcacatcccag
atcttcattggtcctacctactaccagcgcttgaagcacatggtggatgacaaaatccat
tctcgtgcacgagggccaatccagatccttaacagacagcccatggaaggcagatctcgt
gatggtggccttcgctttggagaaatggaacgagattgccagattgctcatggagcagcc
cagttcttgagggaaagattgtttgaggcttcagacccctaccaggtccacgtgtgcaac
ctctgtggaatcatggccattgcaaacaccaggactcacacctacgagtgccgcgggtgc
cgcaacaaaactcagatatctttggttcgaatgccctacgcctgcaaactcctcttccag
gaactgatgtccatgagtatcgcacctcgtatgatgagtgtttag
DBGET
integrated database retrieval system
