Zonotrichia albicollis (white-throated sparrow): 102060804
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Entry
102060804 CDS
T07911
Symbol
PCDH17
Name
(RefSeq) protocadherin-17 isoform X1
KO
K16499
protocadherin delta 2
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
zab04515
]
102060804 (PCDH17)
Cell adhesion molecules [BR:
zab04515
]
Cadherins
Protocadherins
102060804 (PCDH17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
102060804
NCBI-ProteinID:
XP_014122718
Ensembl:
ENSZALG00000017648
UniProt:
A0A8D2NHM4
LinkDB
All DBs
Position
Unknown
AA seq
1202 aa
AA seq
DB search
MYLSICCFFFCWAPALSLKNLNYSVPEEQGAGTVIGNIGRDARLAAGAPGGGMLPAERGV
PGGGGRGPKSTFRVLENSAPHLLDVDGESGLLYTKQRIDREALCRRSAKCQLSLEVFAND
QEICMIKVEIQDLNDNAPSFPSDQVDMDISENAAPGTRFPLTSAHDPDAGDNGLRTYLLT
RDDYGLFSLDVKSRGDGTKFPELVIQKPLDREEQSHHTLVLTALDGGDPPRSGTVQINVR
LIDSNDNSPIFEAASYVVELPENAPLGTAVIDLNATDADEGTNGEVLYSFSGYAPERVRD
LFSIDPQSGLIRVKGNLDYEESGLIEIDVQARDLGPNPIPAHCKVTVRLIDRNDNAPTIG
FVSVRQGALSEAAPPGTVIALVRVTDRDSGKNGQLQCRVLGSGGGPGAVPFTLEENYDNF
YTVVTDRPLDRETQDEYNVTIVARDGGNPPLNSTKSFSVRILDENDNPPRFSKNLYVLQV
PENNIPGEYLGSVLAQDPDLGQNGTVSYSILPGHVGDVSIYTYVSVNPTNGAIYALRSFN
YEQTKHFEFRVLAKDSGSPHRESNATVRVTVLDVNDNAPLIVLPALINDTAELQVPRNAG
VGYPVGTVRALDSDFGESGRLTYEIVEGNEEHLFEMDPTSGEIRTLHPYWEELSPVAELV
VKVSDHGKPSLSAVAKLIVRALAGPLPEAGEPQVNGEQHRRPHWDLSLPLIVTLSTVSII
LLAAMITIAVKCKRENKEIRTYNCRIAEYSHPQLGGGGGNGGGGGGSGSGGGKGKKKKIS
KNDIMLVPSEGEDSRGPLNVMNVVSSPSLATSPMYFDYQTRLPLSSPRSEVMYLKPASNN
LTVPQGHVGCHTSFTGQGTNASEAPPSRMSIIQTDNFPAEPNYMGSRQQFVQSSSTFKDP
ERASLRDSGHGDSDQADSDQDTNKGSCCDMSVREALKMKTTSTKSQPLEQEQQGRGQRPI
VGICGPARCEDGKFSEQEECVNCTDECRVLGHSDRCWMPQFPAASQAENADYRTNLFVPT
VEANVETETYETVNPTGKKTFCTFGKDKREHTILIANVKPYLKAKRALSPLLQEVPSASS
SPTKTCIEPCTSTKGPLDGCEVKSGALAEPSSQYLSTDSQYLSPSKQSKDSSFIASDQMA
RAFADVHSRVSRDSSEMDSVLEQLDRSARDLGRESVDAEEVVREIDKLLQDCRGSDPVAI
RK
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgtacctttccatttgttgcttcttcttctgctgggctcccgccctgtcgctgaagaac
ctgaattactcggtgccggaggagcagggagcgggcacggtcatcgggaacatcgggcgc
gatgcgcggctggcggcaggcgcgccgggaggtgggatgctgcccgcggagcgcggcgtt
cccggcgggggcggccgcggccccaagtccaccttccgggtgctggagaattcagccccg
cacctcctggacgtggacggggagagcgggctgctctacaccaagcagcgcattgaccgt
gaggcgctgtgccggcgcagtgccaagtgccagctgtccctcgaggtgttcgccaatgac
caggagatctgcatgatcaaagtggagattcaggacctgaacgacaacgcgccatcattc
ccctctgaccaagtggacatggacatctccgaaaatgctgcaccaggcacccgcttcccc
ctcaccagcgcccatgacccagacgctggggacaatggtctgcgcacctacctgctcact
cgtgacgactacggcctcttctccctcgatgtgaagtcccgtggtgatggcacaaagttt
ccagagctggtcatccagaagccactagaccgcgaggagcagagtcaccacaccctggtg
ctgacggcattggatggtggtgacccaccgcgctcaggcacggtgcagatcaatgtgcgc
ctcattgactccaatgacaacagccccatctttgaggcagcctcctacgtggtagagctg
ccagagaatgcaccactaggcacagcagtcattgacctcaatgccactgatgctgatgag
ggtaccaatggagaggtgctctactccttcagtggctacgcacctgagcgcgtccgtgac
ctgtttagcatcgacccacagagcggcctcatccgtgtcaagggcaacctggactatgag
gagagtggcctcattgagattgatgtccaagctcgggacctggggccaaatcccatccct
gctcactgcaaggtcactgtccgcctcattgaccgcaacgacaatgctcccaccattggc
tttgtctccgttcgtcagggagctctgagtgaggctgccccaccaggcactgtcattgcc
ctggtgcgggtcaccgaccgagactcaggcaagaacggacaactccagtgccgggtgctg
ggcagtggcggcgggcctggtgctgttcctttcaccctggaggagaactatgacaacttc
tacactgtggtcactgaccgacccctggaccgtgagacgcaggatgagtataatgtgacc
atagtggcacgtgatgggggcaatcccccacttaactccaccaagtcattttctgtccgg
atccttgacgagaatgacaacccaccccgcttcagcaagaatctttatgtgttgcaggta
cctgagaacaatatccctggagagtacctgggctcggtcttggcccaggatcctgacttg
ggccaaaatgggacagtgtcttactccattctgcctgggcatgtgggagatgtctccatc
tacacctatgtctctgtcaaccccacaaatggtgctatttacgctctgaggagcttcaat
tatgagcagacaaagcactttgagttccgcgtgctggccaaagactcgggttcaccccac
cgtgaaagcaatgctacagtgcgcgtcaccgtgctcgatgtcaacgataacgcacccctc
atcgtcctgcctgccctcatcaacgacactgctgagctacaggtgccacgcaatgctggg
gtgggctaccctgtgggcaccgtccgcgccctggacagtgactttggggagagtgggcgc
ctcacctatgaaattgtggaaggcaatgaggagcacctctttgagatggaccccaccagt
ggtgagatacgcaccttgcacccctactgggaggagctcagccctgtggctgaactggtg
gtaaaagtcagtgaccatggcaagcccagcctctctgctgtggccaagctcatagtcagg
gccttggcagggcccctgcccgaggctggcgagccgcaggtgaacggcgagcagcatcgg
cggccgcactgggacttgtcgctgccgctgattgtgacactgagcactgtctccatcatc
ttgctggctgccatgatcactattgctgtgaagtgcaagcgagagaacaaggagatccgc
acctataattgtcgcattgccgagtatagccaccctcagctgggaggagggggaggcaat
ggcgggggaggaggaggcagtggcagtggagggggcaagggcaagaagaagaagatcagc
aagaatgacattatgctggtgcccagtgagggcgaggacagccggggtcccctcaatgtc
atgaacgtggtgagcagcccatccctggccacctcacccatgtactttgactaccagacc
cgcctgcccctcagctctcccaggtctgaggtgatgtacctgaagcccgcctccaacaac
ctgactgtaccccagggacatgtgggctgccacaccagcttcacagggcaagggactaac
gccagcgaggctcccccgagccggatgtccataattcagacagacaattttcccgcagag
cccaattacatgggcagcaggcagcagtttgttcaaagtagctccacgttcaaggatcca
gaaagagccagcttgagggacagcgggcatggggacagtgatcaggctgacagtgaccaa
gacactaacaaaggctcctgctgtgacatgtctgttagggaggcactcaagatgaaaact
acttcaactaaaagccagccacttgaacaagaacagcaaggcagaggccaaagacccatt
gttggtatctgtggaccagcccgctgtgaggatggaaaattttcagaacaagaagaatgt
gttaactgcacagatgaatgcagagtgcttggtcattctgacaggtgttggatgccacag
ttccctgcagccagtcaggctgagaatgcagattatcgcacaaatctctttgtacccacg
gttgaagctaacgttgagactgagacatatgaaactgtgaatcccactgggaaaaagact
ttttgtacatttgggaaagacaagagagagcacactattctcattgccaatgttaaacct
tacttaaaagccaaacgtgccctgagtcctctgcttcaggaggttccctcagcatcgagc
agcccaaccaagacatgcattgagccttgcacctcaacaaaaggaccactggatggttgt
gaagtgaaatcaggagccttggctgaaccaagcagccagtatttgtcaactgacagtcag
tatctatcgcccagtaaacagtcaaaggactcttccttcattgcatcagatcagatggct
agggcctttgcagacgtgcactcccgagtgagccgagactccagtgagatggactctgtt
ctggagcagttagaccgttcagcccgggatctaggcagggagtcggtggatgccgaggaa
gttgtgagagaaatagacaagctcttgcaggactgtcggggaagcgaccctgtggccatc
agaaagtga
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