Zonotrichia albicollis (white-throated sparrow): 102060882
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Entry
102060882 CDS
T07911
Symbol
HERC4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102060882 (HERC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zab04121
]
102060882 (HERC4)
Enzymes [BR:
zab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
102060882 (HERC4)
Ubiquitin system [BR:
zab04121
]
Ubiquitin ligases (E3)
HECT type E3
102060882 (HERC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
102060882
NCBI-ProteinID:
XP_005491085
Ensembl:
ENSZALG00000014396
UniProt:
A0A8D2NAF8
LinkDB
All DBs
Position
Unknown
AA seq
1056 aa
AA seq
DB search
MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCGC
NDLGQLGHDKGRKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPG
TEECVRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQTS
PQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGVNDDTDRYVPTLLKSLR
SQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMGSVVTQIT
CGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVRGNWIPFSTQCPMSTDSEE
CYCVKRIFSGGDQSFAHYFYPQNMVPPDDFRNPDLLKQIWTVNEMFIQRLLSFPSGRLPV
EIANEIDGTFSSAGCLNGSFLALSNDDHYKTSARFSGVDMNAARLLFHKLIQPEHAQISQ
QVAASLEKNLIPKLTSSLPDVEALRLYLTLPECPLMSDENNFTTLAIPFGAAILNLEKAP
LKVLENWWSVLEPPLFLKIVELYKDVVVHLLKVCKMGIPPSDRRILTNFLHTAFRVLEIL
HRVNERGQVIQYDRFYIHEIQDLIDIRNDYANWFQQQVLGMDVNHGLTELTEVPVIICTY
PFVFDAQAKTTLLQTDAIIQMQMAVDQAHRQNLSSLFLPVFESVNPCLIVMVRRDNIVGD
AVEVLRKTKNVDYKKPLKVIFVGEEAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEESRL
IWFSDKTFEDSDLFHLIGVVCGLAIYNFTIVDLHFPLALYKKLLNQKPSLDDLKELMPDV
GRGMQQLLDYPEDDIEEAFCLNFTITVENFGTTEIKELVPKGADIPVVKQNRQDFVDAYV
DYIFNTSVASLYSAFHEGFHKVCGGKVLQLFQPSELQAMVIGNTNYDWKELEKNTEYKGE
YWADHPTIKIFWEVFHELSLEKKKQFLLFLTGSDRIPILGMKCLKLVIQPTGGGEDYLPV
AHTCFNLLDLPKYTDKETLKAKLIQAIDHYEGFSLV
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgctggggcaatgcatcttttggacagcttggattgggtggaatcgatgaagag
attgttttagaacccagaaaaagtgactttttcctaaataaaagggtcagagatgtagga
tgtggactgagacacactgtttttgtcctggatgatgggacagtttatacttgcggatgc
aatgatctgggacaactggggcatgacaaaggcaggaaaagacccgagcatgttggtgca
ctggatgcccaaaatattgtagctgtgtcatgtggagaagcccacactcttgcattaaat
gacaaaggtcaggtatatgcttggggtctggctactgatggacagcttggcttgccagga
acagaggaatgcgtcagagtgcccagaaatattaaaagtttatcagagatccagattgtc
caagttgcttgtggttattatcactcactagcactctcaaaaggaagtgaagtgttttcc
tggggacaaaacaaatatggccagctgggcctaggttatgagtataaaaaacaaacctcc
ccacagatgattaaatctctgctgggaatcccttttgcacagattgcagcaggaggagct
cacagctttgtgctgactctttctggagccatcttcggatggggacgaaacaaatttggg
cagctgggtgttaatgatgacacagacaggtatgttcctaccctgctcaagtccctgaga
agtcagaaggttgttcatatatgttgtggagaggatcatactgctgcccttacaaaggaa
ggtggggttttcacatttggagctggaggctatggtcagctgggacataactctactggc
catgagataaatcccaggaaagtttttgagctcatgggaagtgttgtcacacaaatcacc
tgtggcaggcagcacaccactgcatttgtcccttcttctggaagaatttactcctttgga
ctgggaggcaatgggcagctgggcacagggaccaccagtaacaggaaaagtcccttcaca
gtgagaggaaactggattcccttcagtactcagtgcccaatgagcacagacagtgaggag
tgctactgtgtaaagagaattttctctggtggggaccaaagttttgcacactacttttat
ccacagaacatggtgccaccagatgattttaggaatcctgaccttttgaagcagatctgg
actgtgaatgaaatgtttattcaaagattgctgagtttcccatctggaagacttcctgta
gagatagctaatgaaattgatggaacgttctcctctgctgggtgcctgaatgggagcttt
ttggcactgagcaatgatgatcattacaaaaccagtgctagattctcaggggttgacatg
aatgctgctagactactcttccacaaactcatacagcctgagcacgctcagatatcacaa
caggtggcagctagtttggagaagaaccttattcccaaattgaccagctccttaccagat
gttgaagctctgaggctgtatctcactctaccagagtgcccactgatgagtgatgaaaac
aatttcacaacgttagctattccttttggagcagctattctgaacctggaaaaagctcct
ctgaaagttcttgaaaattggtggtctgtgcttgaacctcccttgttcctgaagatcgtg
gaactctacaaggatgtcgtggtgcaccttttgaaggtgtgcaagatgggcattccccct
tctgacaggagaatcctcaccaatttcctccacacagccttcagagttctggaaatcctg
cacagagtaaatgaaagaggacaagttatacagtatgacagattttacattcatgagata
caagatttgatagatatcagaaatgactatgccaactggttccagcagcaggtgttggga
atggatgtcaaccatggattaactgagttaacagaggttcctgttataatttgcacatac
ccatttgtatttgatgcccaggcaaagacaactctcttgcaaacagatgcaatcatacag
atgcagatggctgtggatcaggcccacaggcagaatctgtcttctctcttcctgccagtg
tttgagtctgtgaacccctgcctgatagtgatggtgcggagggacaacatcgtgggcgac
gctgtggaggtgctcaggaaaacaaagaacgtggactacaagaagcccctcaaggtgatt
tttgtaggggaggaagccgtggatgctggaggcgttcgcaaagagtttttcttgctcatc
atgagggagttgctagatcccaaatatggaatgttcaggtactacgaggagtccaggctg
atctggttctctgataagacctttgaagacagtgacttgtttcatttgattggtgttgtc
tgtgggctagcaatatataattttactattgtagaccttcattttcctctggctttgtac
aaaaagctattgaatcagaaaccatccctggatgacttaaaagaattgatgccagatgtt
ggcaggggaatgcaacagctactggactatccagaggatgacatagaagaagcattttgt
cttaattttactatcactgtggaaaattttggtacaacagaaattaaggagcttgttcct
aaaggtgctgacattcctgtagtcaaacaaaataggcaagattttgtagatgcatacgtg
gattacatcttcaatacatctgtggcttccctatacagtgcattccatgaaggcttccac
aaagtgtgtggaggcaaagttcttcagctcttccagcccagtgagctgcaggcaatggtg
attgggaacacaaattatgactggaaggagctggagaagaacacagaatacaaaggagaa
tactgggcagaccatcctacaattaaaatattctgggaggtttttcacgagttgtctttg
gagaagaagaagcagtttttgttgtttctgaccggcagcgatcggattcccatcctcggg
atgaagtgtctgaagctggtcatccagccaacaggagggggagaggattacctgcccgta
gctcacacttgctttaatcttcttgatcttccaaaatacactgataaagaaaccctgaag
gctaagttgatccaggctatagaccactatgaaggtttcagtttagtataa
DBGET
integrated database retrieval system
