Zonotrichia albicollis (white-throated sparrow): 102061002
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Entry
102061002 CDS
T07911
Symbol
GTF2H2
Name
(RefSeq) general transcription factor IIH subunit 2 isoform X2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03022
Basal transcription factors
zab03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102061002 (GTF2H2)
09124 Replication and repair
03420 Nucleotide excision repair
102061002 (GTF2H2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zab03021
]
102061002 (GTF2H2)
03400 DNA repair and recombination proteins [BR:
zab03400
]
102061002 (GTF2H2)
Transcription machinery [BR:
zab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
102061002 (GTF2H2)
DNA repair and recombination proteins [BR:
zab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
102061002 (GTF2H2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
Zn_ribbon_GTF2H2
IBR
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
102061002
NCBI-ProteinID:
XP_014126593
Ensembl:
ENSZALG00000003473
UniProt:
A0A8D2M5Q6
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MDDEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRLYEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGLIVTKSKRAEKMTEL
SGNSKKHVTALKKAVDMNCSGEPSLYNSLNLAMQTLKHMPGHTSREVLVVLSSLTTCDPA
NIYDLIKCLKAVKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLMHHVSPPP
ASSTSECSLIRMGFPQHTIASLSDQDAKPSFSMAQLENNSDPGLTLGGYFCPQCRAKYCE
LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEVPLEEYKGERYCQGCQGEMKDQNVYIC
KVCQNAFCVECDLFVHDSLHCCPGCIHEHPAPVSV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgaacccgagcggaccaagcgctgggaaggaggctacgaaagaacatgggaa
attcttaaggaagacgaatccgggtctttgaaggcaaccatcgaggacattctcttcaag
gcgaagaggaaaagactctatgaacaccatggacaagttcggcttggaatgatgcgtcac
ctttacgtggttgttgatggatcaagaacgatggaggaccaagacttaaagccaaacaga
cttacttgcactctgaagttattggaatattttgttgaagagtactttgaccagaatcct
attagtcagattggcttaattgtaaccaagagtaaaagagctgaaaaaatgacagaactc
tcaggaaactcaaaaaagcatgtaactgctctgaagaaagcagtggatatgaactgcagt
ggagagccttctctatataattccctaaatttggccatgcagactttaaagcacatgcca
ggacatacaagcagagaggttttggtagtcctcagcagtctgacgacatgtgatccagcc
aacatctatgatctaattaagtgtttaaaagcagtaaagatcagagtatctgtcatcggc
ctaagtgctgaagttcgagtttgtacagtacttgctcgagaaactggtggaacataccac
gttattttggatgaaagtcattataaggaactgctgatgcaccatgtcagtcctccacct
gccagttcaacttctgagtgctcccttattcgaatgggttttcctcagcatactattgct
tctctatctgatcaagatgcaaagccttcctttagcatggcgcaattggaaaataacagt
gacccaggtcttacactgggtggatatttttgtcctcagtgcagagccaaatactgtgag
cttcctgtggaatgcaagatctgtggtcttacgttagtgtctgcacctcacttggctcgg
tcttaccatcacttgtttcctttagatgcctttcaggaagttccactggaagaatacaaa
ggggaacggtattgtcaaggctgccaaggagaaatgaaagatcaaaatgtgtacatatgc
aaagtgtgtcagaacgcgttttgtgtggaatgcgatctgtttgttcatgattcgctgcac
tgctgtcctgggtgtattcacgagcaccctgctcctgtatctgtatga
DBGET
integrated database retrieval system
