Zonotrichia albicollis (white-throated sparrow): 102061149
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Entry
102061149 CDS
T07911
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102061149 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zab03019
]
102061149 (HBS1L)
Messenger RNA biogenesis [BR:
zab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102061149 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
Astrovir_pp_1
DO-GTPase2
GIP1_N
Motif
Other DBs
NCBI-GeneID:
102061149
NCBI-ProteinID:
XP_005488137
Ensembl:
ENSZALG00000010483
UniProt:
A0A8D2MVH1
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MSRHRNVRGYNYDEDFEDDDVYGQSVEDDYCISPSTAAQFIYSRRDKPATFAEPLDEEYG
CEGTDAAADGFTPTHQLTEVDRARLNSCLDQMREVLAESIPEQTMVQAVLDAKFDVQKAL
DLVLSQGSKQNVKTKNKDAVILAKTTKGKTRDSQSPRMESEIVPKIAKMTVSGKKQSMGF
EVPCAIAEENGHTNTPQKGLLAEDASVASGVLEAVSKSTPSPQVVQVSEEQNMVPTPGKK
SSKAKPQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQ
ESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETPTKVITLMDAPGHKDFIPNMIT
GAAQADVAILVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQER
FQEITSKLGQFLKQAGFKESDVAYIPTSGLGGENLVTRGQSNDLTQWYKGKCLLEQIDSF
KPPQRSVDKPFRLCVADVFKDQGSGFCVTGKIEAGYIQVGERLLAMPPNETCTAKGITLH
DEPVDWAAAGDHVSLTLTGMDIIKINVGCVFCDPKEPIKVCTQFRARVLIFNIEVPITKG
FPVLLHYQTVSEPATITRLLSVLHKSTGEVTKKKPKFLAKGQNALIELQTQRPVALELYK
DFKELGRFMLRYSGSTIAAGVVTEIKE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgccacaggaacgtccgaggatataactacgacgaagactttgaagatgatgat
gtgtacggccaatcagtagaagatgattattgcatttctccttcaacagcagctcagttt
atttactccagacgagacaaaccagccacatttgctgagccattagatgaagaatatggc
tgtgaaggtactgatgctgctgctgatggttttacacccactcatcagttgactgaagtt
gatagagcccgtcttaattcatgccttgatcaaatgagagaagttttggcagagtccata
ccagaacaaacaatggtgcaagcagtcctggatgctaaatttgatgtacagaaggctttg
gatcttgtgctttcacaaggcagtaagcaaaatgtgaagaccaagaataaggatgctgtg
attttagcaaagactacaaaaggaaaaacaagggattcccagtcacccagaatggaatct
gaaattgtgccaaaaattgccaaaatgacagtgtctggaaagaaacaatctatgggattt
gaagttccatgtgcgattgctgaggaaaatggccacactaatacacctcagaaaggactg
ttagctgaagatgccagtgtagcttctggagtgcttgaggctgtctcaaaatctacacct
tcaccccaggtagtgcaggtttcagaagagcagaatatggtgcctactccaggaaaaaag
tcaagcaaggcaaaaccacaaatagatgtgaaagcagagttggagaagagacaaggagga
aagcagctgctgaatttggtggtaataggacatgttgatgcaggcaaaagtactttaatg
ggtcatttgctctaccttttgggaaatgtgaacaaaagaactatgcacaaatatgaacag
gaatctaaaaaggctggtaaagcttcatttgcctatgcatgggtcttggatgaaactggt
gaagaaagagaaaggggagtgacaatggatgtgggtatgaccaaatttgagacaccaact
aaagtaattacattgatggatgctccaggccacaaggacttcattccaaatatgatcaca
ggagctgcgcaggctgatgtggcaattctggttgtggatgccagcagaggagagtttgag
gcagggtttgagacaggtggacagactcgagaacatggattattagtgcgctctcttgga
gtgacacagttggctgttgcagtcaataaaatggaccaggtcaattggcaacaggaaaga
tttcaggaaattacaagtaagcttggccaatttcttaagcaagctggctttaaggaatca
gatgtggcttatatcccaacaagtggccttggtggagaaaatctagtcacaaggggtcag
tcaaatgacctcacacaatggtataaaggaaagtgtttgttggagcaaattgattctttc
aagccaccacagagatcagtggataaaccatttagactgtgtgttgctgatgtttttaaa
gaccaaggttcaggattttgtgtgactggtaaaatagaagcaggctatattcaggttgga
gagcgacttctggcaatgcctcccaatgaaacttgcactgcaaaaggaatcacactgcac
gatgaaccagttgattgggctgcagcaggagatcacgttagtctcactttgaccggcatg
gatatcatcaaaatcaatgtgggctgtgtattttgtgatcccaaggagcccattaaagtt
tgcactcagttcagagctcgggttctcatcttcaatattgaggttccaatcactaaagga
tttcctgtgcttttacactatcaaacagtaagtgaacctgctactattacaagactgttg
agtgtcctgcacaaaagtactggtgaagtgacaaagaaaaaacctaagttcttggctaaa
ggccagaatgctctaatagaactacagactcaaagacctgttgctctagagttatacaaa
gattttaaagagctggggagatttatgttacgctacagtggttccactattgctgcagga
gttgttacagagattaaagaatga
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integrated database retrieval system
