Zonotrichia albicollis (white-throated sparrow): 102061219
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Entry
102061219 CDS
T07911
Symbol
NEO1
Name
(RefSeq) neogenin
KO
K06766
neogenin
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab04350
TGF-beta signaling pathway
zab04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
102061219 (NEO1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
102061219 (NEO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
zab04515
]
102061219 (NEO1)
Cell adhesion molecules [BR:
zab04515
]
Immunoglobulin superfamily
DCC/UNC5 family
102061219 (NEO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Pur_ac_phosph_N
Ig_2
ig
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
Tissue_fac
C2-set_2
SusE
TMEM154
TM_ErbB1
EphA2_TM
Herpes_UL74
FAM176
Motif
Other DBs
NCBI-GeneID:
102061219
NCBI-ProteinID:
XP_014124836
Ensembl:
ENSZALG00000016178
LinkDB
All DBs
Position
Unknown
AA seq
1404 aa
AA seq
DB search
MSVVMNCSAQCETPPRIEWRKDGSLLNLVSDDRRQLLPDGSLLINSVVHSKHNKPDEGYY
QCVATVDSLGTIVSRTAKLTVAGLPRFTRQPEPTWVRRGGSAVLACEVTAELAPLLRWER
ERQALGPEARALQLPGGSLLLSNASAADAGLYRCVLDTPGSPKYSEEAELRVLPDAEEPE
KLALLKAPSSLSRLAGQSALLPCVAAGFPPPLVRWARNGEELPADGSGRFQLLPGGVLEI
RDVTEADAGTFTCIAESGNDTLEAQAELAVQVPPTFLKRPANIYAHESMDIVFECEVTGK
PTPTVKWVKNGDVVIPSDYFKIVKEHNLQVLGLVKSDEGFYQCIAENDVGNAQAGAQLII
LDLDVAIPTLPPTSLTSATNDHLAAAAAGPLPSAPRDVVATLVSTRFIRLTWRPPASDPH
GDNLTYSIFYTKEGVNRERVENTSRAGETQVMIQSLMPETVYVFRVVAQSRHGPGESSAP
LKVATQPEVQLPGPAPNIRAFSSSPTSVTVTWETPLSGNGDIQNYKLYYMEKGQHTEQDV
DVAGLSHTLTGLKKFTEYSFRVVAYNKHGPGVSTHDVVVRTLSDVPSAPPQNLTLEVRNS
KSILLQWQPPPAGTQSGQITGYKIRYRRVARKSDVTESVAGTQLSQLIEGLERGTEYSFR
VAAMTINGTGPATDWVSAETFESDLDESRVPEVPSSLHVRPLVTSIVVSWTPPENQDVVV
RGYAIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLYESAVTR
PHSDTSEVDLFVINAPYTPVPDPSPMMPPVGVQASILSHDTIRITWADNSLPKNQKITDA
RFYTVRWKTNIPANTKYKTANATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGT
TFELVPTSPPKDVTVVSKEGKPRTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIE
PVVGNRLTHQIQELTLDTPYFFKIQARNSKGMGPMSEAVQFRTPKAESSDKMPNDQASGS
AGKGSRPLDLGPDYKPPLGGSNSPHGSPTSPLDSNMLLVIIVSVGVITIVIVVIVAVFCT
RRTTSHQKKKRAACKSVNGSHKYKGNSKDVKPPDLWIHHERLELKPIDKSPDPNPIMTDT
PIPRNSQDITPVDNSMDSNIHQRRNSYRGHESEDSMSTLAGRRGMRPKMMMPFDSQPPQP
VISAHPIHSLDPPHHHFHSGSLASPTRSFLQHQLSPWPLGSAMSHSDRADSTESVRNTPS
TDTMPAGSAVPSAELAEPEGPFLPAEEEPQGPPTAHVRPSHPLKSFAVPAVPNAGGPFDP
ALPSTPLLSQQAPGHPLHAVKTASIGTLGRTRPPMPVVVPSAPEVQETTRMLEDSESSYE
PDELTKEMAHLEGLMKDLNAITTA
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggtgatgaactgctcggcgcagtgtgagaccccgccgcggatcgagtggagg
aaggacggctccctcctcaacctcgtgtccgacgaccggcgccagctgctgcccgacggc
tctttgttaatcaacagcgtggtgcactccaagcacaacaaacccgatgagggatattat
cagtgtgtggcaactgtggacagcctggggaccatcgtgagcaggacagccaagctcacc
gtggcaggcctgcccaggttcacgaggcagccggagcccacgtgggtgcgccgcgggggc
agcgccgtgctggcctgcgaggtgacggccgagctggcgccgctgctgcgctgggagcgc
gagcggcaggcgctgggtcctgaggcgcgggcgctgcagctgcccgggggctccctgctg
ctcagcaacgcctcggccgccgacgcggggctctaccgctgcgtgctcgacacccccggc
agccccaagtacagcgaggaggccgagctccgcgtcctgccagatgcagaggagccggag
aagctggcgctgctgaaggcgccctcgtcgctgagccgcctggccgggcagagcgcgctg
ctgccctgcgtggctgccggcttccccccgcccctcgtcaggtgggcacggaacggggag
gagcttcccgccgacgggtctgggcggttccagctgctgccagggggggtgctggagatc
cgggatgtgaccgaggccgatgccgggaccttcacctgcatcgctgagagcggcaacgac
accctggaggcacaggcagagctggcagtgcaagttccccccacgttcctgaagcgccct
gccaacatctacgcgcacgagtccatggacatcgtgtttgagtgcgaggtgaccgggaag
ccaacgccgaccgtcaagtgggtcaagaacggggacgtggtgatccccagcgactacttc
aaaatcgtgaaagaacataacctgcaagttttggggctggtgaagtctgatgaaggattc
tatcagtgcattgcagaaaacgatgtcggaaatgctcaggctggagcccagctgataata
cttgaccttgatgttgccatcccaacattacctcccacttcactgaccagtgccactaat
gaccatctagcagcagcggcagcgggacccctgccctcggccccgcgggacgtcgtggcc
accctggtgtccacccgcttcatccggctcacgtggcgcccgcccgcctccgacccgcac
ggggacaacctcacctactccatcttctacaccaaggagggcgtcaacagggaacgtgtg
gaaaacacgagtcgtgctggagagacgcaggtgatgatccagagcctgatgccagagaca
gtctatgtgttccgcgtggtggcccagagccggcacggccccggcgagagctcggcaccg
ctcaaggtggcaacgcagcccgaggtccagctgcccggccccgctcccaacatccgcgcc
ttctccagctcccccaccagcgtcactgtcacctgggagacgccgctctcgggcaacggg
gacatccagaactacaaactgtactacatggagaagggacagcacacagagcaggacgtg
gacgtggcagggctgtcccacacgctgacagggctgaagaagttcaccgagtacagcttc
cgcgtggtcgcctacaacaagcacggccccggcgtctccacccacgacgtcgtggtgcgc
accctgtccgacgtccccagtgctccaccccagaacctaacgctggaggtccggaattcc
aagagcatcctgctgcagtggcagccccctcctgccggcacccagagcgggcagatcacg
ggctacaagatccgctaccgcagggtggcccgcaagagcgacgtcaccgagagcgtggcg
ggcacccagctctcgcagctcatcgagggtttggagcggggcactgagtacagtttccgc
gtggccgccatgaccatcaacggcaccgggcccgccaccgactgggtgtcagctgagacc
ttcgagagcgacctggatgagagccgcgtgcccgaggtgcccagctcgctgcacgtgcgc
ccgctggtcaccagcatcgtggtgagctggaccccgcccgagaaccaggacgtggtggtc
aggggctacgccatcggctacggcatcggcagcccccacgcccagaccatcaaggtggac
tacaagcagagatactacaccattgagaacctggatcccagctcccactacgtgataacc
ctgaaagccttcaacaacgtgggggaggggatccccctgtacgagagcgccgtgacccgg
ccccactcggacacttccgaggttgatttgtttgttattaatgctccatacactccagtg
ccagatccgtctcccatgatgcccccggtgggagttcaggcttccatcctgagccatgac
accatcaggatcacttgggcagacaactccctgcccaagaaccagaagatcacggacgcg
cgcttctacaccgtccgctggaaaaccaacatccctgccaacaccaagtacaagactgca
aatgccaccaccctgagctacctggtgacggggctgaagccaaacaccctctacgagttc
tcagtgatggtgaccaagggcaggagatccagcacctggagcatgacagcacacgggaca
acctttgaattagtgccaacctctccccccaaggacgtgactgtggtgagcaaggagggc
aagccccgcaccatcatcgtcaactggcagccgccctccgaggccaacggcaaaatcaca
ggctacatcatctactacagcacggacgtcaacgccgagatccacgactgggtcatcgag
cccgtggtgggcaacaggctcacccaccagatccaggagctcaccctggacaccccctac
ttcttcaagatccaggcccgcaactccaagggcatggggcccatgtccgaggccgtgcag
ttccgcacccccaaagctgagtcctcagataaaatgcccaatgaccaagcctcaggatct
gctggcaaggggagccgccccctggacctgggcccggactacaaacccccgctgggaggc
agtaacagcccccatggcagccccacatcccccctggacagcaacatgctgctggtgatc
atcgtgtccgtgggcgtcatcaccatcgtcatcgtcgtcatcgtcgccgtcttctgcacg
cgccgcaccacgtcccaccagaaaaagaaacgagccgcctgcaaatccgtgaacggctcc
cacaagtacaagggcaactccaaagatgtcaaacctccagacctctggatccatcacgag
aggctggagctcaaacccattgataaatccccagatcccaaccccatcatgacagacacc
cccatccctcgcaactcccaggacatcaccccggtggacaactccatggacagcaacatc
catcaaaggaggaattcctaccgaggacacgagtcagaggacagcatgtccacgctggca
ggaaggaggggcatgaggcccaagatgatgatgccttttgattctcagccacctcagcct
gtgattagtgctcatcccatccattccctcgacccccctcaccaccatttccactccggc
agcctcgcctctccaacccgcagcttcctgcagcaccagctcagcccgtggcccctgggc
tctgccatgtcccattcggacagggccgactccacagagtccgtccggaacacgcccagc
acggacacgatgccggcgggctcggccgtgcccagcgcggagctggcggagcccgagggg
ccgttcctgcccgccgaggaggagccgcagggcccccccacggcccacgtgcgcccctcg
caccccctcaagagcttcgccgtgcccgccgtgcccaacgccgggggccccttcgaccct
gccctgcccagcacccccctgctgagccagcaagcccccgggcaccccctgcacgcagtg
aagacggcgtccatcggcaccctgggcaggacccggccgcccatgcccgtggtggtgccc
agcgcccccgaggtgcaggagaccacgcgcatgctggaggactcggagagcagctacgag
cccgacgagctgaccaaagagatggcgcacctggaggggctcatgaaggacctgaacgcc
atcaccacggcgtga
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