Zonotrichia albicollis (white-throated sparrow): 102061581
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Entry
102061581 CDS
T07911
Symbol
DDB1
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03420
Nucleotide excision repair
zab04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102061581 (DDB1)
09124 Replication and repair
03420 Nucleotide excision repair
102061581 (DDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zab04121
]
102061581 (DDB1)
03400 DNA repair and recombination proteins [BR:
zab03400
]
102061581 (DDB1)
Ubiquitin system [BR:
zab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
102061581 (DDB1)
DNA repair and recombination proteins [BR:
zab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
102061581 (DDB1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
102061581 (DDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
102061581
NCBI-ProteinID:
XP_005496844
Ensembl:
ENSZALG00000003747
LinkDB
All DBs
Position
Unknown
AA seq
1140 aa
AA seq
DB search
MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
TAVMELFRPKGESKDLLFILTAKYNACILEYKQNGDSIDIITRAHGNVQDRIGRPSETGI
IGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELQVIDVKFLYGCQAPTICF
VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH
NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPHRE
TDNTLVLSFVGQTRVLMLNGEEVEETELTGFVDDQQTFFCGNVAHQQLIQITSASVRLVS
QEPKSLVSEWKEPNGKNISVASCNSNQVVVAVGRALYYLEIRPQELRQISCTEMEHEVAC
LDITPLGDSNGMSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSH
YLLCALGDGALFYFGLSLETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRKICYQEVSQCFGVLSSRIEVQDASGGTTALRPSASTQALSSSVSTSKLFSSSTAPHET
SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE
AEPKQGRIVVFHYSDGKLQSLAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLSHLGEFVNVFCHGSLVMQNLGET
STPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTER
KTEPATGFIDGDLIESFLDISRPKMQEVVANLQIDDGSGMKREATVDDLIKIVEELTRIH
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacaactacgtggtgacggcgcagaagccgacggccgtcaatggctgcgtcacc
ggacacttcacctctgcggaggacctgaacctgctgattgccaaaaacacccggctggag
atttacgtggtgacggccgaggggctgcggcccgtcaaggaagtggggatgtacgggaaa
acggccgtcatggagctcttccgccccaagggcgagagcaaggatttgctgttcatcctg
acggccaagtacaacgcctgcatcctggagtacaagcagaacggggatagcatcgacatc
atcacccgtgcccatgggaacgtgcaggatcgcatcgggcggccctcggagaccgggatc
atcgggatcatcgatcccgagtgccggatgatcgggctgcgcctctacgacggcctcttc
aaggtcatccccctggaccgggacaacaaggagctgaaggccttcaacatccgcctggag
gagctccaggtcatcgatgtgaaattcctctatggctgccaggctcccaccatctgcttc
gtctaccaggacccccagggccgccacgtgaagacatacgaggtgtccctgcgggagaag
gaattcaacaaaggcccttggaagcaggaaaacgtggaggccgaagcctccatggtcatt
gcagtgccagagcccttcggaggcgccattatcatcgggcaggaatccatcacctaccac
aatggggataaatatctggctattgctcctcccatcatcaagcaaagcaccatcgtgtgc
cacaaccgtgtggatcccaacggatcgcggtatttgctgggagacatggaaggcaggctc
ttcatgctgctcctggagaaggaggagcagatggatggcactgtcaccttgaaggatctg
cgtgtggagctgctgggagagacatccattgcagagtgcctgacctacctggataatgga
gtggtgtttgttggctccaggcttggagattcccagcttgtgaagctcaacgtggacagc
aacgagcagggatcctacgtggtggccatggagaccttcaccaacctcgggcccatcgtg
gacatgtgcgtggtggacctggagaggcaaggccaaggccagctggtcacctgctccggg
gccttcaaagagggatcgctgcggatcatccggaacggcatcgggatccatgagcacgcc
agcatcgacctgccgggaattaaaggattgtggccactgaggtcggatccacaccgggag
acggacaacaccttggtgctgtcatttgttggccagaccagggttctgatgttgaacgga
gaggaggtggaagagacagagctcacaggatttgtggatgaccagcagaccttcttctgt
ggcaacgtggcgcatcagcagctgatccagatcacgtctgcctcggtgcgactggtcagc
caggagcccaaatccctggtgagcgagtggaaagagcccaatgggaagaacatcagcgtc
gcttcctgcaacagcaaccaggtggtggtggccgtgggaagagccttgtactacctggag
atccggccccaggagctccggcagatcagctgcacggagatggagcacgaggtggcctgc
ctggacatcacccccctgggagactccaacgggatgtccccgctctgtgccatcgggctc
tggaccgacatctctgcccgcatcctgaagctgccgtccttcgagctgctgcacaaggag
atgctgggaggagagattatccctcgctccatcctgatgacgaccttcgagagcagccac
tacctcctgtgtgccctgggggatggagctctcttctacttcggcctcagccttgagaca
ggcttgctgagtgacaggaagaaggtgaccctgggcacgcagcccacggtgctgaggaca
ttccgctccctgtccaccaccaacgtgttcgcctgctccgaccgccccactgtcatctac
agcagcaaccacaagctggtcttctccaacgtcaacctcaaggaggtcaactacatgtgc
cccctcaattccgacggatatcctgacagtttggccctggccaacaacagcaccctgacc
attggcaccattgatgagatccagaagctgcacatccgcactgttcctctctatgagtca
cccaggaaaatctgctaccaggaggtatcccagtgcttcggggtgctctccagccggatc
gaggtgcaggatgccagtgggggcaccacagcactcagacccagtgccagcacccaggcc
ttgtccagcagtgtgagcaccagcaagctgttttccagcagcacagctccacacgagaca
tccttcggagaggaggtggaagtgcacaacctgctcatcatagaccagcacacctttgaa
gtgctccatgctcaccaattcctgcaaaatgagtacgccctcagcctggtctcctgcaag
ctgggaaaggatcccaacacctacttcattgtgggcactgccatggtgtatcccgaggaa
gcggagcccaagcagggccggatcgtcgtcttccactactccgatgggaagctgcagagc
ctagctgagaaggaggtcaagggagctgtgtattccatggtggaattcaacgggaagctg
ttagccagcatcaacagcacggtgcgcctgtacgagtggacagcggagaaggaattgcgc
acggagtgcaaccactacaacaacatcatggccctgtacctgaaaaccaagggggatttc
atcctggtgggagacctcatgcgctccgtgctgctcctggcctacaaacccatggaaggg
aattttgaggagattgcccgggatttcaatccaaactggatgagtgccgtggagatcctg
gatgatgataatttcttgggagcggagaacgctttcaatctgtttgtgtgccagaaggac
agcgcggccacgacggacgaggagcggcagcacctgcaggaagtgggattatcccacctg
ggagagttcgtcaatgtcttctgccacggatccctggtcatgcagaacttgggagagact
tccacgcccacccaggggtccgtgctctttggcactgtcaatggaatgatcggcctggtg
acatccctgtcggaaagctggtacaacctgctcctggacatgcagaacaggctcaacaaa
gtcatcaagagcgtggggaagattgagcattccttctggagatcgttccacactgaacgg
aagacggaaccagccacaggattcatcgatggagacttgatcgagagtttcctggacatc
agcaggcccaagatgcaggaagtggtggcaaacctgcagatcgacgatggaagcgggatg
aagagggaagccaccgtggatgacctgatcaagattgtggaggagctgacccggatccat
tag
DBGET
integrated database retrieval system
