Zonotrichia albicollis (white-throated sparrow): 102061785
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Entry
102061785 CDS
T07911
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
102061785 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
zab01001
]
102061785 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
zab04054
]
102061785 (CIITA)
Enzymes [BR:
zab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
102061785 (CIITA)
Protein kinases [BR:
zab01001
]
Serine/threonine kinases: Other
TAF1 family
102061785 (CIITA)
Pattern recognition receptors [BR:
zab04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
102061785 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_9
LRR_8
NB-ARC
LRR_14
nSTAND_NTPase5
NPHP3_N
RsgA_GTPase
nSTAND3
AAA_19
Motif
Other DBs
NCBI-GeneID:
102061785
NCBI-ProteinID:
XP_026649665
Ensembl:
ENSZALG00000015924
LinkDB
All DBs
Position
Unknown
AA seq
1134 aa
AA seq
DB search
MGVMTKRQTMDSVFVPENGYLDLLHSDIDPVHLCTFFDPKSSGDEEGDFSTDLEVDASNY
EQFNNMDFPYENGDGFYPCCNTTDAYAKMAELVEYVLKDQQEKQVEDIFAGNLILDDIAA
ENTEKFPDIKMQSCLKRTFLGSAAESYYDASEPKYKKIVEVPAASAGSGSFFAMPLNSHP
VSCTSLTNQHMSCSVPAAHGLERSLIIPGLSEPLTSECLPASVKGYQENPGLVGAPQQIF
NFVLENGTSEVIVYPVLTSSMETFMSPVFPVNLCAQHTYTTSPGIPDAAVAGKYLEKFQE
VQDSIIPSEEPFKRPEQVETFCSSLKDYFRDTCKSVTMEREVNLDHLFIDGTLVQSQTES
KTGKNSAKAMEKELVTCSLQEKEKTAIDRSQIFQIPQRKDLETKVIVVLGKAGMGKSILV
QKICQDWSNGEFSQFEFVFWFDCKISLPEKQYSLKELLLEFFVKPQEGSKEIFEYMLQNP
DKVLLIFDGFKGLHDHENFPRCSASQPEKDLCSIKELLSGLIQKKILNGCTLLFTARPKD
KLYQFMSKVDKTIEIVGFSPQQRELYITKYFEESLYCDSALKLIKECEYLFSHCYSPVMC
RFVCFLCETVLEMGEKSLPSTLTEVFLKFFQQKIMFMQTDVTNVTTTKNQENLVTLARVA
WCLGEKHQSAMKSDLIPSKEVKEFALKYGFFLPFAFPRHSDSEEEEFGCTFSDFVIQNFL
CALHLLLAEELKDKNLTKYLSFLSKKKKPYNWLDLMPRFVAGLMFLQDDPCFCSLSNEDE
KQSTKKQKTLLKYIRRLQIDTLCPERLLELLCCVYETQNNYLLQHVALRLEPKLSFLGIA
LTPPDVHVLHSVLKRSRKEFSLDLQNSSIDMPGLQALVSLRNVTSFRASLSDTVRLWKSL
EQTKDYELLKASTEKFVLDPFKAKTMKDISDLSDLVEMQEKMMNCVQEASGCTSYEIPAI
RNLRKLEFALGPACGLQGLLKLVKILAAFPSLQHLDLDALSENGIGDEGAKSLSEVFPTL
TSLETLNLSQNKITDLGAENLAAALPSLSSLKTLSLYNNNICDFGAENLAKVLPAMTSLR
VLDVQYNKITGVGAQQLTDSLRKCPQMKNLVMWNPTIPYGVLEHLHQLDSRISV
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgggggtcatgacaaagagacaaaccatggattcagtatttgtgcctgaaaatggctac
cttgatttactgcacagtgatattgacccagtgcatctgtgtactttctttgatccaaag
tcatctggagatgaagaaggtgacttctctacagatcttgaagttgatgccagcaactat
gaacagttcaataatatggatttcccatatgaaaatggagatgggttctacccctgttgc
aacaccacggatgcttatgctaaaatggctgaattagtagaatatgtgctcaaggatcag
caggagaagcaggttgaagacatttttgcagggaaccttattttggatgacattgctgcc
gaaaacactgagaaatttcctgacataaagatgcagtcatgtctcaaacgaactttctta
ggctctgcagcagagagttactatgacgcttcagaacccaaatataagaaaattgtggaa
gtccccgcagcctctgcagggagtggcagtttctttgctatgcctctcaacagccaccca
gtgagctgcacctccctaaccaaccagcacatgtcctgttctgttcctgctgcccacggg
ctggaaaggagcctcatcattcctggattgtcagaacctttgacctcagagtgcctacca
gccagtgtaaaagggtaccaagagaatccaggcttggtaggtgcgcctcagcagatattt
aattttgttcttgaaaatggcacatctgaagttatagtatatccagtgctgacatcttcc
atggaaacattcatgtctccagtttttccagttaatttatgtgcacaacatacgtatacc
accagccctggaattcccgatgcagcagtagcaggtaaatatttagagaaatttcaagaa
gttcaagattccataattccttctgaagaacctttcaaaagaccagagcaagtggaaact
ttctgttcatcccttaaggattatttccgagacacgtgcaaatctgtgaccatggagcgg
gaagtaaatctggatcacctgttcattgatgggacacttgttcaaagtcaaactgaaagc
aagactggaaagaacagtgcaaaagcaatggaaaaggagctggtaacctgcagcctgcaa
gagaaggaaaagacagccattgacagaagccaaatatttcaaatcccacagcgtaaagac
ttagagactaaagtgattgtggtgctgggaaaagcaggaatgggcaaaagcattctcgtt
cagaagatctgccaggactggtccaacggagagttttctcagtttgaatttgtattttgg
tttgactgcaaaataagcttgcctgagaagcaatacagcctgaaggaactgctgcttgaa
ttttttgtaaagcctcaagagggaagcaaagagatctttgagtatatgttgcaaaatcct
gataaagtccttctgatttttgacggttttaaagggttgcacgatcatgagaattttcct
cgttgctcagccagccagcctgaaaaggatttgtgcagcataaaggagctgctttcagga
ctcatccagaaaaagatactcaatggctgtactttattatttacagcaaggccaaaagac
aaactgtaccagttcatgtccaaagtagataagactattgaaattgtaggattttcccct
cagcagagagaattgtacataaccaaatactttgaagaatcactctactgtgatagtgca
ctgaaattaatcaaagagtgtgagtacttgttcagtcattgttacagccctgttatgtgt
agatttgtttgttttctctgtgagacagtgcttgaaatgggagagaaaagtcttccttca
actcttactgaagtcttcctgaaattttttcagcagaagataatgtttatgcaaacagat
gttacaaatgttacaaccacaaaaaatcaagagaatcttgttaccctagctcgtgtagcc
tggtgtcttggagaaaagcaccaaagtgccatgaaaagtgatcttattccttctaaggaa
gttaaagagtttgctctgaagtatgggttcttcctgccatttgcattccccagacattca
gatagtgaagaagaggaatttgggtgcacattctctgattttgtcattcagaatttcttg
tgtgcgcttcaccttttattagcagaagagctcaaggataaaaatctaacaaagtacctg
tcttttctatccaagaagaaaaaaccttataactggttagatttaatgcctcggtttgtg
gctggtttgatgtttctccaggatgatccctgcttctgctctctttcaaatgaggatgaa
aaacagtcaaccaagaagcagaagaccctcttgaaatacattagaaggctgcagattgat
actctctgtccagagaggttgctggagcttttatgttgtgtttatgaaacccagaacaat
tatctcctgcagcatgtggccttaaggctggagccaaagttgtcttttctgggcatagct
cttacaccacctgatgtccatgtactgcactctgttttgaaaaggtcaagaaaagagttt
tccttggatttgcagaacagcagcattgacatgccagggctgcaggccttggtcagcctg
aggaatgtgacatcgttcagggcttccctcagtgacacagtcaggctctggaaatcttta
gagcagacaaaagactacgaactgctgaaagcatccacagagaaatttgttcttgatccc
tttaaggcaaagacaatgaaggacatcagtgacctctccgaccttgtagagatgcaggag
aagatgatgaattgtgtgcaggaagcatctggttgcaccagctatgaaattcctgccatc
agaaacctcagaaaactggaatttgcgctgggtccagcatgtggccttcaaggattgcta
aaactcgtgaaaattcttgcagcatttccatcacttcagcatttagaccttgatgctctg
agtgaaaatggcataggagatgaaggagcaaagagtctatctgaagtctttccaaccctg
acatcactggaaacattaaatttatcacagaataaaataacagacctgggtgcagagaac
cttgctgcagctctcccttccttgtcttccttaaaaacactaagcttgtacaataacaac
atttgcgattttggagcagaaaatctggcaaaggttcttcctgcaatgacatctttaaga
gtgctagatgttcagtataacaaaataactggtgttggagcccagcagctgactgacagc
ctacgaaaatgtccccaaatgaagaacctggtgatgtggaatcccaccattccctatgga
gttcttgaacaccttcaccagctggactccaggatcagtgtgtag
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integrated database retrieval system
