Zonotrichia albicollis (white-throated sparrow): 102061816
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Entry
102061816 CDS
T07911
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab04140
Autophagy - animal
zab04142
Lysosome biogenesis
zab04145
Phagocytosis
zab04148
Efferocytosis
zab05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
102061816 (VPS18)
04142 Lysosome biogenesis
102061816 (VPS18)
04140 Autophagy - animal
102061816 (VPS18)
04148 Efferocytosis
102061816 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102061816 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zab04131
]
102061816 (VPS18)
Membrane trafficking [BR:
zab04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
102061816 (VPS18)
Hops complex
102061816 (VPS18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
zf-C3HC4_2
zf-RING_Vps41
aq_1631
zf-RING_16
zf-RING_5
zf-RING_11
zf-RING_UBOX
Lact-deh-memb
zf-ANAPC11
zf-RING_2
zf_RING_Vps8
DUF8221
Nup54_57_C
LETM1_C
STX17_N
DUF5600
RBSN_mid
zf-rbx1
DUF1664
Motif
Other DBs
NCBI-GeneID:
102061816
NCBI-ProteinID:
XP_005480083
Ensembl:
ENSZALG00000008347
UniProt:
A0A8D2MLY6
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MASILDEYEDSLHRSVSVPQSRATVGIPHSGYVNARLEKETPIFNKQRIDFAPPEKINSL
VVSSNQLCMSLGKDTLLRIDLGKPDEPNQVELGRKDEAKVYKMFLDHTGSHLLIALNTSE
CLYLNRSVQKVRALSRWKGHLIESVGWNKFLGSETNTGPILVGTSQGQIYEAEISVSEGS
LFSTNPDQYFRQVYTLEEESGPAPVCCLEIERGLEGKFFIIATTRKRLFQFVGKVPEGTE
QQGFSSIFAVHADHLPSFREFPANLGFSEIAFYTPKLRSNPRSFAWMMGNGVLYGTLDYS
RPDSILSDERVWVYPPDIDITVNKPISIVLTQFHFLLLLPDRVKAVCTLNGQVVFQDLFL
EKFGLLTRMIKDPTVQQIWIHTEKVVFRYHVQRESRDVWKMYMNMNKFDLAKEYCKDRPE
CLDIVLAKEAEHCFQNKRYLDSAKCYALTQNYFEEIALKFIEAKQEEALMEFLIKKLSNL
KPSEKTQTTLLTTWLTELYLNWLGILQGDLSQRNLYLDTREKFRTFLSSPKNKDCLFNNR
ASIYELLASHGDTEHMVYFAVIMQDYERVVAHHCQHDEYDEALNVLSRHRDEKLFYKFSP
VLIQHIPKKVVDAWISMGSRLDARNLIPALVNYSQSASTQQINEAIRYMEFCVYQLEETQ
QAIHNYLLSLYALCRPDSLLSYLEQAGTNPNRIHYDLKYALRLCAEHGHHRACVHIYKVM
ELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMACLSSC
ALLKIEDVLPFFPDFVTIDHFKEAICNSLEDYNKHIEELKREMEEATQSAKRIREDIQEM
RNKYGSVEPQEKCAACDFPLLNRPFYLFLCGHMFHYDCLLQAVFPNLPAYKQAKLEDLQK
KLAATSQPSKSHHRPKDADTISLGKGQQSREQIKADIDDIVAAECVYCGELMIRSIDKPF
IDPQKYEEEMQSWL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatcctggacgagtacgaggattcgctgcaccgctccgtgtccgtgccgcag
agccgcgccaccgtgggcatcccgcactccggatatgtcaatgcacgactggagaaggaa
acgccaatatttaacaagcagaggattgattttgctcctcctgagaaaattaacagctta
gtggtctcctctaaccaactctgtatgagccttgggaaagacacccttctcaggattgat
cttggaaagccagatgaacctaatcaggtagagctgggacgcaaagatgaagccaaagtc
tacaagatgtttttggaccacacaggctctcatctcctgattgctctgaacaccagcgaa
tgcctttacctgaacagaagtgttcagaaagtgcgggcactctcccgctggaaaggacac
ttgattgaaagtgtgggctggaacaaatttcttggttcagaaaccaacacagggcctatc
ctggtggggacatcccaggggcagatctatgaggctgaaatctctgtcagcgaaggaagc
ctcttcagcactaaccctgaccagtacttccggcaggtctacactctggaggaggaatct
ggacctgccccagtctgctgcttggaaattgaacgagggctagaagggaaattttttatt
atagccaccactaggaagagactctttcagtttgttggcaaggtgcctgaagggacagag
cagcaaggcttcagttccatatttgctgtgcatgctgaccatctgcccagctttcgggag
tttccagccaacttgggtttcagcgagatagccttttacactccaaaactgcgttccaac
ccacgctcttttgcctggatgatgggaaacggtgttctatacggtaccttggattacagt
cgtcctgattcaattctgagtgatgaacgggtctgggtttatcctcctgacattgacata
actgtaaacaagccaatatccattgtgcttacccagttccactttctgttgctgctgcct
gaccgggtgaaggctgtctgcactctgaacggacaggttgtttttcaggatctgttcctg
gagaagtttggcttgctgacacgcatgattaaagatcccacagtccagcagatatggatc
cacactgagaaagtagtgttccgctaccatgtccagcgggaatccagagatgtgtggaag
atgtatatgaatatgaacaaatttgatttagcaaaagagtattgtaaggaccgtccagag
tgtcttgacattgtgttggccaaagaggcagagcactgtttccaaaacaagaggtatctg
gacagtgccaaatgttatgcgctgacccagaactactttgaggaaattgctctgaagttc
attgaagccaagcaagaggaggccctgatggagtttctgattaagaagctaagtaaccta
aagccttcagagaagacacagactactctgctgaccacgtggttgacagagctgtacctg
aactggctgggcatattgcaaggagatctctcccagcgaaatctctatttggatacacgg
gagaagttccgcactttcctgagcagccctaaaaacaaagactgtctttttaataatcgg
gcgtctatttatgaactgttggcaagccatggcgacacagagcacatggtctactttgca
gtcatcatgcaggattacgagcgtgtagtagctcaccactgccagcatgatgagtacgat
gaggctctaaatgtgctgtccaggcacagagatgagaaactcttctacaagttctctccg
gttctcatccagcatattcccaagaaggtggttgatgcttggatttctatgggctctagg
ctggatgccaggaacctcattccagcccttgttaactacagccagagtgccagcacccag
cagatcaatgaagccatcagatatatggagttctgtgtctaccagttggaggaaacccag
caagccattcacaactacctgttgtctctttatgctttgtgtcggccggactcgttgctg
tcatacctggagcaagcaggaaccaacccaaacaggatccactacgacctgaagtatgca
ctacgcctgtgtgcagagcatgggcaccaccgtgcatgtgtccacatttacaaagtgatg
gaattatatgaggaggctgtggatctcgccttacaggtggatgttgatcttgccaagtcc
tgtgcagatcttcctgaagatgatgaggagctccggaagaagctgtggttgaagatcgct
cgccatgttgttcaggaagagaaggatgtcaagaaggcaatggcctgcctctccagctgt
gccctgctgaagattgaggatgtgctgccattctttccagactttgtcactattgaccat
ttcaaggaggcaatctgtaactccctggaggattacaacaagcacatcgaggagctgaaa
agggagatggaggaagccacacagagtgccaagaggatccgagaggacatccaggaaatg
agaaataaatatggctctgtggagcctcaggaaaaatgtgctgcttgtgactttcctctt
ctaaaccgccctttttaccttttcctctgtggtcacatgtttcactacgactgtctcctt
caagcagttttccctaaccttcctgcctataagcaggcaaaacttgaagatcttcagaag
aagctggcagctaccagccagccatccaagagccaccatcgtcccaaggatgcagacacc
attagtttggggaaagggcagcagagccgggaacagatcaaagctgacattgatgacatt
gtggcagctgagtgtgtgtactgtggtgagctgatgatccggtccattgacaaacctttt
attgatccccagaagtacgaagaggagatgcaaagctggctgtaa
DBGET
integrated database retrieval system
