Zonotrichia albicollis (white-throated sparrow): 102061861
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Entry
102061861 CDS
T07911
Symbol
NECTIN1
Name
(RefSeq) nectin-1 isoform X2
KO
K06081
poliovirus receptor-related protein 1
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03266
Virion - Herpesvirus
zab04514
Cell adhesion molecule (CAM) interaction
zab04517
IgSF CAM signaling
zab04520
Adherens junction
zab05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
102061861 (NECTIN1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
102061861 (NECTIN1)
04517 IgSF CAM signaling
102061861 (NECTIN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
102061861 (NECTIN1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102061861 (NECTIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
zab04515
]
102061861 (NECTIN1)
04090 CD molecules [BR:
zab04090
]
102061861 (NECTIN1)
Cell adhesion molecules [BR:
zab04515
]
Immunoglobulin superfamily
Nectin family
102061861 (NECTIN1)
CD molecules [BR:
zab04090
]
Proteins
102061861 (NECTIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
V-set
Ig_3
ig
Ig_2
I-set
TM_ErbB1
Ig_PVRIG
Syndecan
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
102061861
NCBI-ProteinID:
XP_005494648
Ensembl:
ENSZALG00000010136
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MASRPQTSCRASWWTIGVCILAAALLPGLQAQSVLVNDSVSGFIGTDVVLHCSFTNPLPI
VKITQVTWQKATNGTKQNVAIYNPAMGVSILSPYKERVTFRNPSFKDGTIQLSRLELDDE
GVYICEFATFPTGNREGQLNLTVLAKPTNWMEGTKRPLIAKSGRTEKILVATCTSSNGKP
PSTVTWDTKLKGEAEFQEIRNSNGTITVISRYRLVPSREAHRQQLMCVVNYQLERFTDSI
TLNVQYEPEVTIEGFDGNWFLNRKDVKLICKSDANPPAHTYEWKLPNGTLPGSVEIQNNT
IYFKGPVSYSVAGTYVCEATNAIGTRSGLVEVNVTEFPYTPSPIDDHKSMVQPNIPTPVI
GGIVGGVSLVLLVAVVLFVVLRRRRHTFKGDYSTKKHVYGNGYSKAGIPQHHPPMAQNLQ
YPDDSDDEKKPGPLGGSTYEDEDEDAGGERKLGGPKAYEEDAKRPYFTVDEGEAHPEPYD
ERTLGFQYDPEQLDLADNMVSQTDGSFISKKEWYV
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcttcacggccgcagacaagttgccgtgcatcgtggtggactatcggagtttgcatc
ctggcagccgcgctcctaccagggctgcaagctcagagcgtcttggtcaatgactccgtc
tcggggttcatcggcacagacgtggtgctgcactgcagcttcaccaacccgctgcccatc
gtgaagatcacgcaggtgacgtggcagaaggccaccaacggcaccaagcagaatgtggcc
atctacaaccccgccatgggcgtgtccatcctgtccccctacaaggagagggtgactttc
cgcaacccttccttcaaggatggcaccatccagctgtcccggctggagctggacgatgag
ggcgtttacatctgtgagtttgccaccttccccaccggcaaccgggaagggcagctgaac
ctcaccgtgctggccaagcccaccaactggatggagggcaccaagaggcctctaatcgcc
aagtctggcaggacagagaagatcttggtggccacctgcacctcctccaacgggaaaccc
cccagcaccgtcacctgggacacgaagctgaagggggaggcggagttccaggagatccgg
aacagcaacggcaccatcacggtgatcagccggtaccggctggtgccgagccgcgaggcg
caccgccagcagctcatgtgcgtggtcaactaccagctggagaggttcaccgacagcatc
accctcaacgtgcagtatgagccagaagtcaccatcgagggctttgatggcaactggttc
ctgaaccgcaaggatgtgaagctgatctgcaagtctgatgccaaccccccagctcacacc
tacgaatggaagctgccaaacgggaccctgccagggagtgtggaaatccagaacaacacc
atctacttcaaagggcccgtgtcctacagcgtggctggcacctacgtctgcgaggccacc
aacgccatcgggacacgctcgggcctggtggaggtcaatgtcacagaatttccctacacc
ccgtctccaatcgatgatcacaaatccatggtgcagccgaacatccccacaccggtgatt
gggggcatagtgggaggcgtctcgctggtcctgctggtggccgtggtgctctttgtggta
ctccggcgccggcgtcacaccttcaagggtgactacagcacaaagaagcacgtgtacggc
aacggctacagcaaggctggcatcccacagcaccacccccccatggcccagaacctgcag
taccccgacgactcggacgacgagaagaagccgggccccttgggcggcagcacctacgag
gacgaggatgaggatgccggaggagagcgcaagctgggcggccccaaagcctacgaggag
gatgccaagaggccttacttcaccgtggacgagggcgaggcccaccccgaaccttacgac
gagaggacactcggcttccagtacgaccccgagcagctcgacctggccgacaacatggtg
tcgcagaccgacggctcttttatttccaaaaaggagtggtacgtgtag
DBGET
integrated database retrieval system
