Zonotrichia albicollis (white-throated sparrow): 102061878
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Entry
102061878 CDS
T07911
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102061878 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zab03019
]
102061878 (NDC1)
Messenger RNA biogenesis [BR:
zab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102061878 (NDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
GP41
Motif
Other DBs
NCBI-GeneID:
102061878
NCBI-ProteinID:
XP_005482333
Ensembl:
ENSZALG00000003463
LinkDB
All DBs
Position
Unknown
AA seq
672 aa
AA seq
DB search
MEGAAGGQRALLRQVLGWRVAAAVTWSVLLLPLCTAAFIVLSGLDPFHPVRWISKSFNDL
YTSYVIFCIFLMSVVIIVISIFNVEFYAVVPSIPCSRLALIGKIIHPQQVIHSFVHAIMG
MLVAWCATVMTKGRFQFLAVSCTPSESLEDAVPQMCLNEYHLFFLLSGAFLGYSYSLFFL
INNMNYLPFPIIQQYKYLRFRRSLPLLIKHSCVESLYFVRNFCVTYYFFGYIPKVWICTT
MGLHTDSKLHPLDTLSGLLDLSLFYHTWLSGVFLLMTWYIAWLLFKIYATESHHFPIQPT
FAQETDQCLPKILNSNPPLLIKFLALQDLMLLSQYSPVRRQEVFSLSQPGGHPHNWTAIS
RECLSLLSDLTQRLIAQQEAAAANGRAKPPVGELKVPPQTPGAAGIEDMSFQSQRSNIVL
RASMSPLVKPSLMPVKMSPGSDVGSPFSSPALSYKMGAVDVKSPWHGTVQSPHVTRRGPK
LWTSVSDQQMNGSHHEPSPVLSAARTGSEAVQPKFIYTWLQNKQEQIKNFLSKRALIMYF
FSKHPEASIQAVFCDAQMHIWALEGLSHLVAASFTEDQFGVVQTTLPAILNTLLTLQEVV
DRHFKLPHVSSKPPRISGSLVDTSYKTLRFALRASLKTALYRITTVFGEHLNAVQVSTEH
KKRLQQFLDYKE
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggagggggcggcgggcgggcagcgggcgctgctccggcaggttctgggctggcgagtg
gccgccgccgtgacctggtccgtgctgctgctgcccctctgcaccgcggccttcatcgtg
ctcagcggcctcgacccgttccacccggtgcgctggatctccaagtctttcaatgatttg
tatacttcttatgtcatcttttgtatcttcctgatgtctgtggtgataatagtaataagc
atcttcaacgttgaattttatgcagtggtgccatcaataccatgctctcgattagcactg
ataggaaaaattattcaccctcagcaagtgatccattcctttgttcatgctatcatggga
atgttggttgcttggtgtgctacagtcatgacaaaagggaggttccagtttcttgctgtg
tcctgcacaccttcagaaagcctagaagatgctgttcctcagatgtgcctaaatgagtat
cacctcttctttctgctttctggagctttcttgggatacagctacagcctcttctttctt
attaacaacatgaattatttgccatttccaatcatacagcaatacaagtatttacgtttc
agaagatctttgcctctcctgataaaacacagttgtgtggaatcactctattttgttaga
aacttctgtgtcacatattacttttttggttacatcccaaaggtttggatatgtaccacg
atgggccttcatacagacagcaaattacatcctcttgacactctgagtggcttattggat
ctctccttgttttaccatacctggctgagtggtgtgttcctcctgatgacctggtacatt
gcttggctgctcttcaaaatctatgccacagagagtcatcattttcccattcaaccaacg
tttgctcaggagacagaccagtgcctgcctaaaattctgaacagcaatcctcccctcctt
ataaagtttttagccttacaagacttgatgttactttcccagtattctcctgttcgacga
caggaagtcttcagcctcagtcagccaggtgggcacccacacaactggactgcaatatcc
cgggagtgcctgagtctcctcagtgacctgacccagaggctgattgcacagcaggaagca
gcagcagcaaatgggagagcaaagccaccagtgggagagctgaaagtacctccacagact
ccaggagctgctgggatagaagatatgtcattccagtcacagaggtccaacattgttctc
agagcctccatgtctcccctggttaagccatccctgatgcctgtgaagatgtctcctggc
tctgatgttggttcacctttcagctctcctgctttaagttacaagatgggagctgtggat
gtaaaatctccttggcatggaacagttcaaagtccccatgtcacgaggaggggaccaaag
ctgtggacgtcggtttcagatcagcaaatgaatggttcccaccatgaaccctcccctgtg
ctctctgctgcaagaactgggagtgaggcagtgcagccaaaatttatttacacatggctt
cagaacaagcaagaacagataaaaaacttcttgtccaaacgggcattgataatgtatttc
ttcagcaagcacccagaagcctccatccaggctgtcttctgtgatgcccaaatgcacatc
tgggctttggaaggtctgtctcacttggtagcagcctccttcactgaagaccagtttgga
gttgtccaaactacactgccagctatcctgaacacgctactgactcttcaggaggtcgta
gacagacatttcaaactgccacatgtttctagcaaacctccccggatttcagggagcctg
gtggacacatcctacaaaacactaagatttgcacttagagcatctctgaaaacagctctc
tacaggataactactgtctttggagaacacttgaatgctgtacaagtgtctacagaacat
aagaaaagacttcagcaattcctggactacaaagaataa
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